| functional annotation |
| Function |
Auxin-responsive GH3 family protein |
|
| GO BP |
|
GO:0016046 [list] [network] detection of fungus
|
(1 genes)
|
IMP
|
 |
|
GO:0018874 [list] [network] benzoate metabolic process
|
(3 genes)
|
IDA
|
|
|
GO:0034052 [list] [network] positive regulation of plant-type hypersensitive response
|
(10 genes)
|
IMP
|
|
|
GO:0010112 [list] [network] regulation of systemic acquired resistance
|
(23 genes)
|
IMP
|
|
|
GO:0009863 [list] [network] salicylic acid mediated signaling pathway
|
(77 genes)
|
IEP
|
|
|
GO:0071456 [list] [network] cellular response to hypoxia
|
(241 genes)
|
IEP
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(980 genes)
|
IEP
IMP
|
|
|
GO:0006952 [list] [network] defense response
|
(2370 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0052625 [list] [network] 4-aminobenzoate amino acid synthetase activity
|
(1 genes)
|
IDA
|
|
|
GO:0052626 [list] [network] benzoate amino acid synthetase activity
|
(1 genes)
|
IDA
|
|
|
GO:0052627 [list] [network] vanillate amino acid synthetase activity
|
(1 genes)
|
IDA
|
|
|
GO:0052628 [list] [network] 4-hydroxybenzoate amino acid synthetase activity
|
(1 genes)
|
IDA
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
ath04075 [list] [network] Plant hormone signal transduction (291 genes) |
 |
| Protein |
NP_001330075.1
NP_001330076.1
NP_196836.1
|
| BLAST |
NP_001330075.1
NP_001330076.1
NP_196836.1
|
| Orthologous |
[Ortholog page]
AT1G23160 (ath)
LOC103835680 (bra)
LOC103846581 (bra)
LOC103850859 (bra)
LOC103856011 (bra)
|
Subcellular
localization
wolf |
|
cyto 4,
nucl 3,
chlo 2,
cyto_pero 2,
cyto_E.R. 2,
cyto_plas 2
|
(predict for NP_001330075.1)
|
|
cyto 6,
chlo 1,
nucl 1,
extr 1,
pero 1,
chlo_mito 1
|
(predict for NP_001330076.1)
|
|
cyto 6,
chlo 1,
nucl 1,
extr 1,
pero 1,
chlo_mito 1
|
(predict for NP_196836.1)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001330075.1)
|
|
other 8
|
(predict for NP_001330076.1)
|
|
other 8
|
(predict for NP_196836.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04626 |
Plant-pathogen interaction |
2 |
 |
Genes directly connected with PBS3 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 12.2 |
PUB54 |
plant U-box 54 |
[detail] |
839251 |
| 11.1 |
AT3G47480 |
Calcium-binding EF-hand family protein |
[detail] |
823902 |
| 9.7 |
EDS16 |
ADC synthase superfamily protein |
[detail] |
843810 |
| 9.0 |
FMO1 |
flavin-dependent monooxygenase 1 |
[detail] |
838508 |
| 8.3 |
AT5G25260 |
SPFH/Band 7/PHB domain-containing membrane-associated protein family |
[detail] |
832597 |
| 7.1 |
AT1G44130 |
Eukaryotic aspartyl protease family protein |
[detail] |
841016 |
| 7.1 |
AT3G48640 |
uncharacterized protein |
[detail] |
824024 |
| 6.7 |
AT3G60415 |
phosphoglycerate mutase family protein |
[detail] |
28719419 |
| 4.8 |
AT5G51465 |
uncharacterized protein |
[detail] |
28721262 |
|
Coexpressed
gene list |
[Coexpressed gene list for PBS3]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
250286_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
250286_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
250286_at
X axis is samples (xls file), and Y axis is log-expression.
|
At5g13320 Gene
