ATTED-II : GeneID search result

[←][→] ath AT5G13410 Gene

functional annotation

Function

FKBP-like peptidyl-prolyl cis-trans isomerase family protein

GO BP

GO CC

GO:0009543 [list] [network] chloroplast thylakoid lumen	(59 genes)	IDA IEA
GO:0031977 [list] [network] thylakoid lumen	(72 genes)	IDA
GO:0009535 [list] [network] chloroplast thylakoid membrane	(373 genes)	IDA
GO:0009579 [list] [network] thylakoid	(543 genes)	IBA IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	HDA IBA IDA ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity

(54 genes)

IEA

KEGG

Protein

NP_001332702.1 NP_001332703.1 NP_196845.1

BLAST

NP_001332702.1 NP_001332703.1 NP_196845.1

Orthologous

[Ortholog page] LOC4342342 (osa) LOC7482827 (ppo) LOC11411758 (mtr) LOC100257384 (vvi) LOC100272703 (zma) LOC100797411 (gma) FKBP19 (sly) LOC103850866 (bra)

Subcellular
localization
wolf

chlo 10	(predict for NP_001332702.1)
chlo 9, nucl 1, vacu 1	(predict for NP_001332703.1)
chlo 10	(predict for NP_196845.1)

Subcellular
localization
TargetP

chlo 8	(predict for NP_001332702.1)
chlo 8	(predict for NP_001332703.1)
chlo 8	(predict for NP_196845.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G13410 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.3	AT2G26340	hypothetical protein	[detail]	817174
7.2	AT1G27385	phosphoribosylformylglycinamidine synthase	[detail]	839628
7.0	AT3G48420	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[detail]	824000
6.2	PGL34	plastoglobulin 34kD	[detail]	824970
6.2	NOL	NYC1-like protein	[detail]	830372

Coexpressed
gene list

[Coexpressed gene list for AT5G13410]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250262_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250262_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250262_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831182
Refseq ID (protein)	NP_001332702.1
	NP_001332703.1
	NP_196845.1

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