[←][→] ath   At5g13480 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein      
GO BP
GO:0031124 [list] [network] mRNA 3'-end processing  (11 genes)  IEA  
GO:0009909 [list] [network] regulation of flower development  (171 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (183 genes)  IGI  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_001318555.1  NP_001331011.1  NP_001331012.1  NP_196852.3 
BLAST NP_001318555.1  NP_001331011.1  NP_001331012.1  NP_196852.3 
Orthologous [Ortholog page] LOC4325772 (osa)  LOC7462786 (ppo)  LOC7487007 (ppo)  LOC11443981 (mtr)  LOC100788493 (gma)  LOC100791889 (gma)  LOC101263044 (sly)  LOC103850872 (bra)  LOC103856018 (bra)  LOC123104354 (tae)  LOC123112633 (tae)  LOC123122123 (tae)  LOC123399837 (hvu) 
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1,  extr 1,  E.R. 1  (predict for NP_001318555.1)
nucl 4,  pero 4,  chlo 1,  extr 1,  E.R. 1  (predict for NP_001331011.1)
nucl 4,  pero 4,  chlo 1,  extr 1,  E.R. 1  (predict for NP_001331012.1)
nucl 4,  pero 4,  cyto_nucl 3  (predict for NP_196852.3)
Subcellular
localization
TargetP
other 6  (predict for NP_001318555.1)
chlo 6,  other 4  (predict for NP_001331011.1)
chlo 6,  other 4  (predict for NP_001331012.1)
other 5  (predict for NP_196852.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 3
Genes directly connected with FY on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 CPSF100 cleavage and polyadenylation specificity factor 100 [detail] 832453
6.9 AT5G51300 splicing factor-like protein [detail] 835204
6.8 AT1G07970 cytochrome B561, amino-terminal protein [detail] 837312
6.2 AT1G34360 translation initiation factor 3 (IF-3) family protein [detail] 840338
5.1 RAD23A Rad23 UV excision repair protein family [detail] 838188
Coexpressed
gene list		 [Coexpressed gene list for FY]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245848_at
245848_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245848_at
245848_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245848_at
245848_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831191      
Refseq ID (protein) NP_001318555.1 
NP_001331011.1 
NP_001331012.1 
NP_196852.3 


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