[←][→] ath   At5g13960 Gene
functional annotation
Function   histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010216 [list] [network] maintenance of DNA methylation  (8 genes)  IDA  
GO:0051567 [list] [network] histone H3-K9 methylation  (11 genes)  IMP  
GO:0018022 [list] [network] peptidyl-lysine methylation  (53 genes)  IDA  
GO:0016571 [list] [network] histone methylation  (75 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0046974 [list] [network] histone H3K9 methyltransferase activity  (1 genes)  IDA  
GO:0010428 [list] [network] methyl-CpNpG binding  (8 genes)  IDA  
GO:0010429 [list] [network] methyl-CpNpN binding  (8 genes)  IDA  
GO:0010385 [list] [network] double-stranded methylated DNA binding  (9 genes)  IDA  
GO:0008327 [list] [network] methyl-CpG binding  (20 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00310 [list] [network] Lysine degradation (31 genes)
Protein NP_001332445.1  NP_196900.1 
BLAST NP_001332445.1  NP_196900.1 
Orthologous [Ortholog page] LOC4326952 (osa)  LOC7458012 (ppo)  LOC7462391 (ppo)  LOC11438560 (mtr)  LOC25496588 (mtr)  LOC25496593 (mtr)  LOC100795584 (gma)  LOC100796701 (gma)  LOC100812749 (gma)  LOC101260505 (sly)  LOC103856044 (bra)  LOC123063194 (tae)  LOC123072098 (tae)  LOC123080386 (tae)  LOC123130888 (tae)  LOC123159176 (tae)  LOC123445308 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001332445.1)
nucl 7,  cyto 3  (predict for NP_196900.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332445.1)
other 5,  mito 3  (predict for NP_196900.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03430 Mismatch repair 3
ath00270 Cysteine and methionine metabolism 2
ath03420 Nucleotide excision repair 2
Genes directly connected with SUVH4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 CHR1 chromatin remodeling 1 [detail] 836808
7.3 AT3G54750 downstream neighbor of Son [detail] 824640
7.0 APC6 anaphase promoting complex 6 [detail] 844213
6.6 MSH1 MUTL protein homolog 1 [detail] 822021
Coexpressed
gene list		 [Coexpressed gene list for SUVH4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250212_at
250212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250212_at
250212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250212_at
250212_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831244      
Refseq ID (protein) NP_001332445.1 
NP_196900.1 


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