[←][→] ath   AT5G13980 Gene
functional annotation
Function   Glycosyl hydrolase family 38 protein  
GO BP
GO CC
GO:0099503 [list] [network] secretory vesicle  (169 genes)  HDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030246 [list] [network] carbohydrate binding  (303 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00511 [list] [network] Other glycan degradation (19 genes)
Protein NP_001031878.1  NP_196902.2  NP_851037.2 
BLAST NP_001031878.1  NP_196902.2  NP_851037.2 
Orthologous [Ortholog page] LOC542217 (zma)  AT3G26720 (ath)  AT5G66150 (ath)  LOC4348080 (osa)  LOC4350617 (osa)  LOC7454599 (ppo)  LOC7458009 (ppo)  LOC7462452 (ppo)  LOC11421286 (mtr)  LOC11427062 (mtr)  LOC11436262 (mtr)  LOC11440154 (mtr)  LOC100193937 (zma)  LOC100244533 (vvi)  LOC100249067 (vvi)  LOC100252482 (vvi)  LOC100259071 (vvi)  LOC100266854 (vvi)  LOC100500729 (sly)  LOC100775419 (gma)  LOC100776282 (gma)  LOC100795651 (gma)  LOC100798150 (gma)  LOC100802094 (gma)  LOC100806041 (gma)  LOC100806748 (gma)  LOC101263369 (sly)  LOC103638174 (zma)  LOC103638195 (zma)  LOC103837673 (bra)  LOC103856046 (bra)  LOC103875277 (bra) 
Subcellular
localization
wolf
plas 3,  E.R. 2,  nucl_plas 2,  cyto_plas 2  (predict for NP_001031878.1)
plas 3,  chlo 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_196902.2)
plas 3,  chlo 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_851037.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031878.1)
scret 9  (predict for NP_196902.2)
scret 9  (predict for NP_851037.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00511 Other glycan degradation 3
Genes directly connected with AT5G13980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT3G26720 Glycosyl hydrolase family 38 protein [detail] 822284
6.5 RDR6 RNA-dependent RNA polymerase 6 [detail] 824112
5.6 AT1G72410 COP1-interacting protein-like protein [detail] 843573
Coexpressed
gene list		 [Coexpressed gene list for AT5G13980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250203_at
250203_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250203_at
250203_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250203_at
250203_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831246      
Refseq ID (protein) NP_001031878.1 
NP_196902.2 
NP_851037.2 


The preparation time of this page was 0.2 [sec].