[←][→] ath   At5g14580 Gene
functional annotation
Function   polyribonucleotide nucleotidyltransferase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000957 [list] [network] mitochondrial RNA catabolic process  (1 genes)  IMP  
GO:0000963 [list] [network] mitochondrial RNA processing  (24 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0004654 [list] [network] polyribonucleotide nucleotidyltransferase activity  (2 genes)  IMP  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (8 genes)  IMP  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_196962.1 
BLAST NP_196962.1 
Orthologous [Ortholog page] LOC4329995 (osa)  LOC7487862 (ppo)  LOC11434901 (mtr)  LOC100816982 (gma)  LOC101256146 (sly)  LOC103846477 (bra)  LOC103856086 (bra)  LOC123127761 (tae)  LOC123137482 (tae)  LOC123144840 (tae)  LOC123405999 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_196962.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for NP_196962.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03040 Spliceosome 2
Genes directly connected with AT5G14580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.3 AT5G09840 Putative endonuclease or glycosyl hydrolase [detail] 830844
13.1 AT3G03060 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 821146
12.7 AT5G16930 AAA-type ATPase family protein [detail] 831556
12.5 LON1 lon protease 1 [detail] 832744
12.1 ABO6 DEA(D/H)-box RNA helicase family protein [detail] 830371
11.5 AT1G64600 copper ion binding / methyltransferase [detail] 842768
11.5 PYRD pyrimidine d [detail] 832394
10.5 AT5G60730 Anion-transporting ATPase [detail] 836194
10.2 GR-RBP3 glycine-rich RNA-binding protein 3 [detail] 836224
9.8 AT1G51380 DEA(D/H)-box RNA helicase family protein [detail] 841562
9.8 AT5G19300 methyltransferase C9orf114 protein [detail] 832050
9.6 AT2G42710 Ribosomal protein L1p/L10e family [detail] 818871
Coexpressed
gene list		 [Coexpressed gene list for AT5G14580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250196_at
250196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250196_at
250196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250196_at
250196_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831309      
Refseq ID (protein) NP_196962.1 


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