[←][→] ath   AT5G15170 Gene
functional annotation
Function   tyrosyl-DNA phosphodiesterase-like protein  
GO BP
GO:0000012 [list] [network] single strand break repair  (4 genes)  IBA  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA  
GO MF
GO:0017005 [list] [network] 3'-tyrosyl-DNA phosphodiesterase activity  (2 genes)  IBA IDA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0004527 [list] [network] exonuclease activity  (97 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
KEGG
Protein NP_197021.2 
BLAST NP_197021.2 
Orthologous [Ortholog page] LOC4343446 (osa)  LOC7479095 (ppo)  LOC11437867 (mtr)  LOC100247070 (vvi)  LOC100383136 (zma)  LOC100793746 (gma)  LOC101257338 (sly)  LOC103856120 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for NP_197021.2)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_197021.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TDP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.9 AT5G35930 AMP-dependent synthetase and ligase family protein [detail] 833582
4.8 AT5G16610 hypothetical protein [detail] 831523
4.8 AT5G03180 RING/U-box superfamily protein [detail] 831897
Coexpressed
gene list		 [Coexpressed gene list for TDP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250156_at
250156_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250156_at
250156_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250156_at
250156_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831369      
Refseq ID (protein) NP_197021.2 


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