[][] ath   At5g15540 Gene
functional annotation
Function   PHD finger family protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0034508 [list] [network] centromere complex assembly  (7 genes)  IMP  
GO:0051177 [list] [network] meiotic sister chromatid cohesion  (15 genes)  IMP  
GO:0007062 [list] [network] sister chromatid cohesion  (30 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190317.1  NP_197058.2 
BLAST NP_001190317.1  NP_197058.2 
Orthologous [Ortholog page] LOC4342227 (osa)LOC7484570 (ppo)LOC11413944 (mtr)LOC100792021 (gma)LOC100797795 (gma)LOC101259220 (sly)LOC103846405 (bra)LOC103850988 (bra)LOC123045123 (tae)LOC123052958 (tae)LOC123426364 (hvu)
Subcellular
localization
wolf
nucl 5,  plas 4,  mito_plas 2  (predict for NP_001190317.1)
nucl 5,  plas 4,  mito_plas 2  (predict for NP_197058.2)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_001190317.1)
chlo 5,  other 3  (predict for NP_197058.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with EMB2773 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.3 SNL1 SIN3-like 1 [detail] 821265
10.3 AT3G24880 Helicase/SANT-associated, DNA binding protein [detail] 822086
10.2 HAC12 histone acetyltransferase of the CBP family 12 [detail] 838242
8.2 EDM2 ENHANCED DOWNY MILDEW 2 [detail] 835632
8.1 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein [detail] 842655
6.5 TSL Protein kinase superfamily protein [detail] 832217
6.0 RL2 Root hair defective 3 GTP-binding protein (RHD3) [detail] 834552
5.4 AT4G10730 Protein kinase superfamily protein [detail] 826667
5.0 AT5G11470 bromo-adjacent homology (BAH) domain-containing protein [detail] 831018
Coexpressed
gene list
[Coexpressed gene list for EMB2773]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246558_at
246558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246558_at
246558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246558_at
246558_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831407    
Refseq ID (protein) NP_001190317.1 
NP_197058.2 


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