[←][→] ath   AT5G16780 Gene
functional annotation
Function   SART-1 family  
GO BP
GO:0000481 [list] [network] maturation of 5S rRNA  (3 genes)  IBA  
GO:0010588 [list] [network] cotyledon vascular tissue pattern formation  (18 genes)  IMP  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (33 genes)  IMP  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (38 genes)  IBA  
GO:0009933 [list] [network] meristem structural organization  (54 genes)  IMP  
GO:0010087 [list] [network] phloem or xylem histogenesis  (102 genes)  IMP  
GO:0048528 [list] [network] post-embryonic root development  (128 genes)  IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (812 genes)  IMP  
GO CC
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (27 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001318573.1  NP_001330040.1  NP_197180.1 
BLAST NP_001318573.1  NP_001330040.1  NP_197180.1 
Orthologous [Ortholog page] LOC4329455 (osa)  LOC7477810 (ppo)  LOC11421963 (mtr)  LOC25482516 (mtr)  LOC25482541 (mtr)  LOC100266959 (vvi)  LOC100502327 (zma)  LOC100785682 (gma)  LOC100787646 (gma)  LOC100793984 (gma)  LOC101246008 (sly)  LOC103846295 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001318573.1)
nucl 9,  cyto 1  (predict for NP_001330040.1)
nucl 9,  cyto 1  (predict for NP_197180.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318573.1)
other 8  (predict for NP_001330040.1)
other 8  (predict for NP_197180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with DOT2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.1 AT3G49601 pre-mRNA-splicing factor [detail] 6241216
11.5 AT5G53440 LOW protein: zinc finger CCCH domain protein [detail] 835425
11.1 CDC5 cell division cycle 5 [detail] 837506
10.8 RRC1 RNA recognition motif (RRM)-containing protein [detail] 832577
10.0 AT4G21660 proline-rich spliceosome-associated (PSP) family protein [detail] 828253
9.7 AT1G20920 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 838685
9.6 AT1G03910 cactus-binding carboxy-terminal, cactin [detail] 839371
9.1 AT1G18950 DDT domain superfamily [detail] 838476
8.8 AT1G61690 phosphoinositide binding protein [detail] 842466
8.7 CHR11 chromatin-remodeling protein 11 [detail] 819814
8.7 AT1G56290 CwfJ-like family protein [detail] 842082
8.4 TOP1ALPHA DNA topoisomerase I alpha [detail] 835623
8.2 HOS15 WD-40 repeat family protein [detail] 836867
8.1 AT5G48610 myb-like protein X [detail] 834918
8.0 AT5G08630 DDT domain-containing protein [detail] 830764
8.0 AT1G32530 RING/U-box superfamily protein [detail] 840147
7.9 AT4G19190 zinc knuckle (CCHC-type) family protein [detail] 827658
7.4 AT1G65280 DNAJ heat shock N-terminal domain-containing protein [detail] 842835
7.0 AT4G36520 Chaperone DnaJ-domain superfamily protein [detail] 829804
6.4 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family protein [detail] 838712
6.2 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 820444
6.2 ASHH1 SET domain group 26 [detail] 844005
Coexpressed
gene list		 [Coexpressed gene list for DOT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246447_at
246447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246447_at
246447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246447_at
246447_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831541      
Refseq ID (protein) NP_001318573.1 
NP_001330040.1 
NP_197180.1 


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