[][] ath   AT5G17520 Gene
functional annotation
Function   root cap 1 (RCP1)
GO BP
GO:0000023 [list] [network] maltose metabolic process  (4 genes)  IMP  
GO:0005983 [list] [network] starch catabolic process  (17 genes)  IMP TAS  
GO:0009624 [list] [network] response to nematode  (84 genes)  IEP  
GO:0009629 [list] [network] response to gravity  (98 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IMP  
GO:0007154 [list] [network] cell communication  (1893 genes)  IMP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IMP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IDA TAS  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0005363 [list] [network] maltose transmembrane transporter activity  (3 genes)  IBA IDA TAS  
KEGG
Protein NP_001330869.1  NP_568349.1 
BLAST NP_001330869.1  NP_568349.1 
Orthologous [Ortholog page] LOC4336889 (osa)AT5G17523 (ath)LOC25480543 (mtr)LOC100245892 (vvi)LOC100283084 (zma)LOC100803466 (gma)LOC101261407 (sly)LOC103833181 (bra)LOC103851112 (bra)
Subcellular
localization
wolf
plas 7,  golg 1,  chlo 1,  vacu 1  (predict for NP_001330869.1)
plas 4,  vacu 2,  nucl_plas 2,  cysk_plas 2  (predict for NP_568349.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_001330869.1)
chlo 9  (predict for NP_568349.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 5
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with RCP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.3 SEX4 dual specificity protein phosphatase (DsPTP1) family protein [detail] 824383
6.2 COR314-TM2 cold regulated 314 thylakoid membrane 2 [detail] 839814
6.0 AT5G02240 NAD(P)-binding Rossmann-fold superfamily protein [detail] 830851
5.9 AT4G16060 hypothetical protein [detail] 827291
Coexpressed
gene list
[Coexpressed gene list for RCP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246434_at
246434_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246434_at
246434_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246434_at
246434_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831618    
Refseq ID (protein) NP_001330869.1 
NP_568349.1 


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