[←][→] ath   AT5G17580 Gene
functional annotation
Function   Phototropic-responsive NPH3 family protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001330290.1  NP_197260.1 
BLAST NP_001330290.1  NP_197260.1 
Orthologous [Ortholog page] LOC7493880 (ppo)  LOC100257419 (vvi)  LOC101251510 (sly)  LOC101267032 (sly)  LOC103833185 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2,  extr 1,  cysk 1  (predict for NP_001330290.1)
nucl 4,  chlo 4,  cyto_nucl 3  (predict for NP_197260.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001330290.1)
other 5  (predict for NP_197260.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with AT5G17580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 SEC1A secretory 1A [detail] 839288
5.1 ATNTH1 DNA glycosylase superfamily protein [detail] 817703
4.9 XIJ P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 824985
4.6 AT5G06440 polyketide cyclase/dehydrase/lipid transport superfamily protein [detail] 830532
3.3 AT1G55550 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 842004
Coexpressed
gene list		 [Coexpressed gene list for AT5G17580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246438_at
246438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246438_at
246438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246438_at
246438_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831624      
Refseq ID (protein) NP_001330290.1 
NP_197260.1 


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