[←][→] ath   AT5G20620 Gene
functional annotation
Function   ubiquitin 4  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0019941 [list] [network] modification-dependent protein catabolic process  (445 genes)  IBA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0031386 [list] [network] protein tag  (27 genes)  IBA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
KEGG
Protein NP_001332370.1  NP_568397.1 
BLAST NP_001332370.1  NP_568397.1 
Orthologous [Ortholog page] LOC542322 (zma)  UBQ11 (ath)  UBQ10 (ath)  UBQ14 (ath)  UBQ3 (ath)  UBQ9 (ath)  UBQ12 (ath)  UBQ13 (ath)  LOC4328390 (osa)  LOC4337080 (osa)  LOC4341814 (osa)  LOC4341860 (osa)  LOC7485436 (ppo)  LOC9272016 (osa)  LOC11421243 (mtr)  LOC11422346 (mtr)  LOC11431263 (mtr)  LOC11434120 (mtr)  LOC11443904 (mtr)  LOC25492931 (mtr)  LOC25501783 (mtr)  LOC25502891 (mtr)  LOC100252768 (vvi)  LOC100267431 (vvi)  LOC100282068 (zma)  LOC100782546 (gma)  SUBI-1 (gma)  SUBI-1 (gma)  LOC100800638 (gma)  LOC100815545 (gma)  LOC100817214 (gma)  LOC100819694 (gma)  LOC101256039 (sly)  LOC101258282 (sly)  ubq1-1 (sly)  LOC103626648 (zma)  LOC103834437 (bra)  LOC103838224 (bra)  LOC103839752 (bra)  LOC103839755 (bra)  LOC103847397 (bra)  LOC103858685 (bra)  LOC103869289 (bra)  LOC103874046 (bra)  LOC104877307 (vvi)  SUBI-2 (gma) 
Subcellular
localization
wolf
cyto 6,  cyto_nucl 5,  chlo 2  (predict for NP_001332370.1)
cyto 6,  cyto_nucl 5,  chlo 1,  nucl 1  (predict for NP_568397.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332370.1)
other 8  (predict for NP_568397.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath03050 Proteasome 4
Genes directly connected with UBQ4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 UBQ3 polyubiquitin 3 [detail] 831899
8.1 UBQ14 Ubiquitin family protein [detail] 828148
4.9 RAD23D Rad23 UV excision repair protein family [detail] 833835
Coexpressed
gene list		 [Coexpressed gene list for UBQ4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245989_s_at
245989_s_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245989_s_at
245989_s_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245989_s_at
245989_s_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832184      
Refseq ID (protein) NP_001332370.1 
NP_568397.1 


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