[←][→] ath   At5g23120 Gene
functional annotation
Function   photosystem II stability/assembly factor, chloroplast (HCF136)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009657 [list] [network] plastid organization  (280 genes)  IMP  
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IMP  
GO CC
GO:0009533 [list] [network] chloroplast stromal thylakoid  (8 genes)  IDA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA IDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_001332175.1  NP_197703.1 
BLAST NP_001332175.1  NP_197703.1 
Orthologous [Ortholog page] LOC7457185 (ppo)  LOC11439200 (mtr)  LOC100805606 (gma)  LOC100810566 (gma)  LOC101259493 (sly)  LOC103860525 (bra)  LOC107275792 (osa)  LOC123161889 (tae)  LOC123168012 (tae)  LOC123409041 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 2,  E.R. 2  (predict for NP_001332175.1)
chlo 9  (predict for NP_197703.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332175.1)
chlo 9  (predict for NP_197703.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 5
ath01200 Carbon metabolism 3
ath00710 Carbon fixation in photosynthetic organisms 2
ath01230 Biosynthesis of amino acids 2
ath00190 Oxidative phosphorylation 2
Genes directly connected with HCF136 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 PETC photosynthetic electron transfer C [detail] 827996
9.1 PDE334 ATPase, F0 complex, subunit B/B', bacterial/chloroplast [detail] 829359
8.8 AT1G71500 Rieske (2Fe-2S) domain-containing protein [detail] 843491
8.8 TAPX thylakoidal ascorbate peroxidase [detail] 844085
7.1 AT5G59250 Major facilitator superfamily protein [detail] 836043
Coexpressed
gene list		 [Coexpressed gene list for HCF136]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249875_at
249875_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249875_at
249875_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249875_at
249875_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832376      
Refseq ID (protein) NP_001332175.1 
NP_197703.1 


The preparation time of this page was 0.5 [sec].