[←][→] ath   At5g24300 Gene
functional annotation
Function   Glycogen/starch synthases, ADP-glucose type    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010021 [list] [network] amylopectin biosynthetic process  (7 genes)  IDA  
GO:0019252 [list] [network] starch biosynthetic process  (25 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0033201 [list] [network] alpha-1,4-glucan synthase activity  (4 genes)  IEA  
GO:0004373 [list] [network] glycogen (starch) synthase activity  (5 genes)  IEA  
GO:0009011 [list] [network] starch synthase activity  (5 genes)  IDA  
KEGG ath00500 [list] [network] Starch and sucrose metabolism (172 genes)
Protein NP_001190378.1  NP_197818.1 
BLAST NP_001190378.1  NP_197818.1 
Orthologous [Ortholog page] LOC542831 (tae)  LOC7464543 (ppo)  LOC9269493 (osa)  LOC11421652 (mtr)  LOC100807354 (gma)  LOC100814548 (gma)  LOC101259221 (sly)  LOC103874297 (bra)  LOC123148007 (tae)  LOC123163063 (tae)  LOC123406939 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_001190378.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_197818.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001190378.1)
chlo 9  (predict for NP_197818.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 10
Genes directly connected with SS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 SBE2.2 starch branching enzyme 2.2 [detail] 831769
6.5 DPE2 disproportionating enzyme 2 [detail] 818682
6.5 AMY3 alpha-amylase-like 3 [detail] 843319
6.3 LSF1 uncharacterized protein [detail] 821127
6.2 AT5G16810 Protein kinase superfamily protein [detail] 831544
5.6 ASA2 anthranilate synthase 2 [detail] 817519
Coexpressed
gene list		 [Coexpressed gene list for SS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249785_at
249785_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249785_at
249785_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249785_at
249785_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832497      
Refseq ID (protein) NP_001190378.1 
NP_197818.1 


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