[←][→] ath   At5g24630 Gene
functional annotation
Function   double-stranded DNA binding protein      
GO BP
GO:0009913 [list] [network] epidermal cell differentiation  (14 genes)  IMP  
GO:0030307 [list] [network] positive regulation of cell growth  (21 genes)  IMP  
GO:0042023 [list] [network] DNA endoreduplication  (22 genes)  IEA IMP  
GO:0010090 [list] [network] trichome morphogenesis  (66 genes)  IMP  
GO:0051276 [list] [network] chromosome organization  (142 genes)  IMP  
GO:0048364 [list] [network] root development  (1192 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IMP  
GO CC
GO:0009330 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex  (3 genes)  IEA IPI  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IDA IEA  
KEGG
Protein NP_001154735.1  NP_001154736.1  NP_001154737.1  NP_001154738.1  NP_001154739.1  NP_001330963.1  NP_001330964.1  NP_001330965.1  NP_001330966.1  NP_001330967.1  NP_001330968.1  NP_197851.5 
BLAST NP_001154735.1  NP_001154736.1  NP_001154737.1  NP_001154738.1  NP_001154739.1  NP_001330963.1  NP_001330964.1  NP_001330965.1  NP_001330966.1  NP_001330967.1  NP_001330968.1  NP_197851.5 
Orthologous [Ortholog page] LOC4328289 (osa)  LOC4328294 (osa)  LOC7486704 (ppo)  LOC11443488 (mtr)  LOC100795660 (gma)  LOC100812582 (gma)  LOC101256852 (sly)  LOC103837066 (bra)  LOC103874327 (bra)  LOC123132237 (tae)  LOC123136281 (tae)  LOC123143785 (tae)  LOC123401307 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154735.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154736.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154737.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154738.1)
nucl 9,  cyto_nucl 5  (predict for NP_001154739.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330963.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330964.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330965.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330966.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330967.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330968.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_197851.5)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001154735.1)
other 5,  chlo 3  (predict for NP_001154736.1)
other 5,  chlo 3  (predict for NP_001154737.1)
other 5,  chlo 3  (predict for NP_001154738.1)
other 6,  chlo 3  (predict for NP_001154739.1)
other 5,  chlo 3  (predict for NP_001330963.1)
other 5,  chlo 3  (predict for NP_001330964.1)
other 5,  chlo 3  (predict for NP_001330965.1)
other 5,  chlo 3  (predict for NP_001330966.1)
other 5,  chlo 3  (predict for NP_001330967.1)
other 5,  chlo 3  (predict for NP_001330968.1)
other 5,  chlo 4  (predict for NP_197851.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03410 Base excision repair 5
ath03430 Mismatch repair 4
ath03420 Nucleotide excision repair 4
ath03440 Homologous recombination 3
Genes directly connected with BIN4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 POLD3 DNA-directed DNA polymerase [detail] 844201
6.6 MEI1 transcription coactivator [detail] 844068
5.4 MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836267
Coexpressed
gene list		 [Coexpressed gene list for BIN4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249749_at
249749_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249749_at
249749_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249749_at
249749_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832534      
Refseq ID (protein) NP_001154735.1 
NP_001154736.1 
NP_001154737.1 
NP_001154738.1 
NP_001154739.1 
NP_001330963.1 
NP_001330964.1 
NP_001330965.1 
NP_001330966.1 
NP_001330967.1 
NP_001330968.1 
NP_197851.5 


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