[←][→] ath   AT5G24630 Gene
functional annotation
Function   double-stranded DNA binding protein  
GO BP
GO:0009913 [list] [network] epidermal cell differentiation  (14 genes)  IMP  
GO:0030307 [list] [network] positive regulation of cell growth  (20 genes)  IMP  
GO:0042023 [list] [network] DNA endoreduplication  (21 genes)  IMP  
GO:0010090 [list] [network] trichome morphogenesis  (62 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO:0051276 [list] [network] chromosome organization  (498 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (812 genes)  IMP  
GO CC
GO:0009330 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex  (4 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IDA  
KEGG
Protein NP_001154735.1  NP_001154736.1  NP_001154737.1  NP_001154738.1  NP_001154739.1  NP_001330963.1  NP_001330964.1  NP_001330965.1  NP_001330966.1  NP_001330967.1  NP_001330968.1  NP_197851.5 
BLAST NP_001154735.1  NP_001154736.1  NP_001154737.1  NP_001154738.1  NP_001154739.1  NP_001330963.1  NP_001330964.1  NP_001330965.1  NP_001330966.1  NP_001330967.1  NP_001330968.1  NP_197851.5 
Orthologous [Ortholog page] LOC4328289 (osa)  LOC4328294 (osa)  LOC7486704 (ppo)  LOC11443488 (mtr)  LOC100252112 (vvi)  LOC100273715 (zma)  LOC100795660 (gma)  LOC100812582 (gma)  LOC101256852 (sly)  LOC103837066 (bra)  LOC103874327 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154735.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154736.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154737.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154738.1)
nucl 9,  cyto_nucl 5  (predict for NP_001154739.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330963.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330964.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330965.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330966.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330967.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330968.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_197851.5)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001154735.1)
other 5,  chlo 3  (predict for NP_001154736.1)
other 5,  chlo 3  (predict for NP_001154737.1)
other 5,  chlo 3  (predict for NP_001154738.1)
other 6,  chlo 3  (predict for NP_001154739.1)
other 5,  chlo 3  (predict for NP_001330963.1)
other 5,  chlo 3  (predict for NP_001330964.1)
other 5,  chlo 3  (predict for NP_001330965.1)
other 5,  chlo 3  (predict for NP_001330966.1)
other 5,  chlo 3  (predict for NP_001330967.1)
other 5,  chlo 3  (predict for NP_001330968.1)
other 5,  chlo 4  (predict for NP_197851.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03410 Base excision repair 6
ath03430 Mismatch repair 4
ath03420 Nucleotide excision repair 4
ath03440 Homologous recombination 3
Genes directly connected with BIN4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 MEI1 transcription coactivator [detail] 844068
6.5 POLD3 DNA-directed DNA polymerase [detail] 844201
5.7 MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836267
Coexpressed
gene list		 [Coexpressed gene list for BIN4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249749_at
249749_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249749_at
249749_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249749_at
249749_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832534      
Refseq ID (protein) NP_001154735.1 
NP_001154736.1 
NP_001154737.1 
NP_001154738.1 
NP_001154739.1 
NP_001330963.1 
NP_001330964.1 
NP_001330965.1 
NP_001330966.1 
NP_001330967.1 
NP_001330968.1 
NP_197851.5 


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