[←][→] ath   AT5G25520 Gene
functional annotation
Function   SPOC domain / Transcription elongation factor S-II protein  
GO BP
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IEA  
GO:0006414 [list] [network] translational elongation  (693 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (48 genes)  IEA  
KEGG
Protein NP_001331210.1  NP_001331211.1  NP_001331212.1  NP_001331213.1  NP_001331214.1  NP_197934.2  NP_974833.1 
BLAST NP_001331210.1  NP_001331211.1  NP_001331212.1  NP_001331213.1  NP_001331214.1  NP_197934.2  NP_974833.1 
Orthologous [Ortholog page] AT2G25640 (ath)  AT5G11430 (ath)  LOC4328690 (osa)  LOC4341430 (osa)  LOC7458998 (ppo)  LOC7471561 (ppo)  LOC11425857 (mtr)  LOC100267937 (vvi)  LOC100501569 (zma)  LOC100791982 (gma)  LOC100808809 (gma)  LOC101249111 (sly)  LOC103627127 (zma)  LOC103649038 (zma)  LOC103846720 (bra)  LOC103864683 (bra)  LOC103874412 (bra) 
Subcellular
localization
wolf
nucl 6,  vacu 2,  golg 1  (predict for NP_001331210.1)
nucl 10  (predict for NP_001331211.1)
nucl 10  (predict for NP_001331212.1)
nucl 10  (predict for NP_001331213.1)
nucl 10  (predict for NP_001331214.1)
nucl 10  (predict for NP_197934.2)
nucl 10  (predict for NP_974833.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001331210.1)
other 9  (predict for NP_001331211.1)
other 9  (predict for NP_001331212.1)
other 9  (predict for NP_001331213.1)
other 9  (predict for NP_001331214.1)
other 9  (predict for NP_197934.2)
other 9  (predict for NP_974833.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G25520 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.3 AT3G62900 CW-type Zinc Finger [detail] 825465
9.6 PI-4KBETA1 phosphatidylinositol 4-OH kinase beta1 [detail] 836528
9.1 AT1G15240 phox (PX) domain-containing protein [detail] 838091
5.8 VIP2 VIRE2 interacting protein 2 [detail] 836092
5.7 AT1G71240 chromosome-partitioning protein, putative (DUF639) [detail] 843465
5.5 FES1 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 817951
Coexpressed
gene list		 [Coexpressed gene list for AT5G25520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246893_at
246893_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246893_at
246893_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246893_at
246893_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832627      
Refseq ID (protein) NP_001331210.1 
NP_001331211.1 
NP_001331212.1 
NP_001331213.1 
NP_001331214.1 
NP_197934.2 
NP_974833.1 


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