[←][→] ath   At5g26980 Gene
functional annotation
Function   syntaxin of plants 41      
GO BP
GO:0098629 [list] [network] trans-Golgi network membrane organization  (3 genes)  IMP  
GO:0043001 [list] [network] Golgi to plasma membrane protein transport  (4 genes)  IMP  
GO:0006896 [list] [network] Golgi to vacuole transport  (9 genes)  IMP  
GO:0006906 [list] [network] vesicle fusion  (9 genes)  IDA  
GO:0007030 [list] [network] Golgi organization  (15 genes)  IMP  
GO:0061025 [list] [network] membrane fusion  (34 genes)  TAS  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (77 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0006886 [list] [network] intracellular protein transport  (216 genes)  IMP TAS  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IMP  
GO CC
GO:0031201 [list] [network] SNARE complex  (8 genes)  IDA  
GO:0030140 [list] [network] trans-Golgi network transport vesicle  (11 genes)  TAS  
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  IDA TAS  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  ISM  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (29 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (47 genes)
Protein NP_001031950.1  NP_001331924.1  NP_198050.1 
BLAST NP_001031950.1  NP_001331924.1  NP_198050.1 
Orthologous [Ortholog page] SYP43 (ath)  SYP42 (ath)  LOC4339929 (osa)  LOC7460430 (ppo)  LOC7478916 (ppo)  LOC11407189 (mtr)  LOC18098621 (ppo)  LOC25499622 (mtr)  LOC100789659 (gma)  LOC100796741 (gma)  LOC100797056 (gma)  LOC100803629 (gma)  LOC101263154 (sly)  LOC101265370 (sly)  LOC103836768 (bra)  LOC103849906 (bra)  LOC103870798 (bra)  LOC123088277 (tae)  LOC123149703 (tae)  LOC123167797 (tae)  LOC123411453 (hvu) 
Subcellular
localization
wolf
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_001031950.1)
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_001331924.1)
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_198050.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001031950.1)
mito 9  (predict for NP_001331924.1)
mito 9  (predict for NP_198050.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
Genes directly connected with SYP41 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.8 PLDGAMMA2 phospholipase D gamma 2 [detail] 826789
8.1 AT2G25590 Plant Tudor-like protein [detail] 817098
6.8 AT1G02960 kinetochore protein [detail] 839363
6.6 AT3G27610 Nucleotidylyl transferase superfamily protein [detail] 822383
5.9 AT5G58790 uncharacterized protein [detail] 835996
5.7 ATE2 arginine-tRNA protein transferase 2 [detail] 820295
5.0 AT5G49500 Signal recognition particle, SRP54 subunit protein [detail] 835010
Coexpressed
gene list		 [Coexpressed gene list for SYP41]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246803_at
246803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246803_at
246803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246803_at
246803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832756      
Refseq ID (protein) NP_001031950.1 
NP_001331924.1 
NP_198050.1 


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