[←][→] ath   AT5G27470 Gene
functional annotation
Function   seryl-tRNA synthetase / serine-tRNA ligase  
GO BP
GO:0006434 [list] [network] seryl-tRNA aminoacylation  (1 genes)  IBA  
GO:0097056 [list] [network] selenocysteinyl-tRNA(Sec) biosynthetic process  (2 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA ISS  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004828 [list] [network] serine-tRNA ligase activity  (2 genes)  IBA  
GO:0000049 [list] [network] tRNA binding  (23 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (94 genes)
Protein NP_198099.1 
BLAST NP_198099.1 
Orthologous [Ortholog page] LOC541989 (zma)  LOC4324679 (osa)  LOC7486390 (ppo)  LOC11426408 (mtr)  LOC100261399 (vvi)  LOC100272738 (zma)  LOC100279490 (zma)  LOC100781350 (gma)  LOC101263161 (sly)  LOC103837177 (bra)  LOC103837178 (bra)  LOC103837197 (bra)  LOC103854660 (bra)  LOC103874527 (bra)  LOC109943264 (zma) 
Subcellular
localization
wolf
pero 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_198099.1)
Subcellular
localization
TargetP
other 8  (predict for NP_198099.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
ath03013 RNA transport 4
Genes directly connected with AT5G27470 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 TIF3B1 translation initiation factor 3B1 [detail] 832826
10.0 ATKRS-1 lysyl-tRNA synthetase 1 [detail] 820343
8.5 AT1G30580 GTP binding protein [detail] 839938
7.8 AT3G62120 Class II aaRS and biotin synthetases superfamily protein [detail] 825385
7.1 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic [detail] 832718
6.4 U2A' U2 small nuclear ribonucleoprotein A [detail] 837505
Coexpressed
gene list		 [Coexpressed gene list for AT5G27470]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246780_at
246780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246780_at
246780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246780_at
246780_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832806      
Refseq ID (protein) NP_198099.1 


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