[←][→] ath   At5g27990 Gene
functional annotation
Function   Pre-rRNA-processing protein TSR2, conserved region    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO MF
KEGG
Protein NP_001318666.1  NP_198151.1 
BLAST NP_001318666.1  NP_198151.1 
Orthologous [Ortholog page] AT3G22510 (ath)  LOC4345991 (osa)  LOC7498074 (ppo)  LOC11406184 (mtr)  LOC11407204 (mtr)  LOC11409247 (mtr)  LOC11428553 (mtr)  LOC11444735 (mtr)  LOC18098916 (ppo)  LOC18110972 (ppo)  LOC100500102 (gma)  LOC100795708 (gma)  LOC100812091 (gma)  LOC100817824 (gma)  LOC101248332 (sly)  LOC103833543 (bra)  LOC103837320 (bra)  LOC103869034 (bra)  LOC103874831 (bra)  LOC112325891 (ppo)  LOC123087346 (tae)  LOC123090586 (tae)  LOC123095627 (tae)  LOC123112875 (tae)  LOC123112883 (tae)  LOC123191426 (tae)  LOC123446947 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_001318666.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_198151.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318666.1)
other 7  (predict for NP_198151.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT5G27990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT4G27380 uncharacterized protein [detail] 828846
8.3 SDN3 small RNA degrading nuclease 3 [detail] 836859
8.2 AT1G25260 Ribosomal protein L10 family protein [detail] 839109
8.1 AT3G02220 small acidic-like protein [detail] 821238
Coexpressed
gene list		 [Coexpressed gene list for AT5G27990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246699_at
246699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246699_at
246699_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246699_at
246699_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832869      
Refseq ID (protein) NP_001318666.1 
NP_198151.1 


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