[←][→] ath   AT5G35210 Gene
functional annotation
Function   PHD type transcription factor with transmembrane domain protein (PTM)  
GO BP
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (9 genes)  IDA  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IDA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (55 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (14 genes)  IDA  
KEGG
Protein NP_001318674.1  NP_198371.3 
BLAST NP_001318674.1  NP_198371.3 
Orthologous [Ortholog page] AT5G22760 (ath)  LOC4349776 (osa)  LOC7474928 (ppo)  LOC11430495 (mtr)  LOC25487491 (mtr)  LOC25487492 (mtr)  LOC100243147 (vvi)  LOC100794210 (gma)  LOC100796377 (gma)  LOC100808261 (gma)  LOC100808614 (gma)  LOC101262223 (sly)  LOC101266795 (sly)  LOC103640745 (zma)  LOC103647086 (zma)  LOC103851462 (bra)  LOC103856529 (bra)  LOC103873000 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  plas 1,  mito 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001318674.1)
nucl 6,  mito 1,  cysk 1  (predict for NP_198371.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001318674.1)
other 8  (predict for NP_198371.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PTM on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 SETH5 transducin family protein / WD-40 repeat family protein [detail] 828005
10.0 AT5G08230 tudor/PWWP/MBT domain protein [detail] 830719
9.9 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817375
7.6 SDG25 SET domain protein 25 [detail] 834246
6.5 ATX2 trithorax-like protein 2 [detail] 837093
6.4 AT5G46190 RNA-binding KH domain-containing protein [detail] 834661
5.7 SRFR1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829901
5.4 AT3G19780 hypothetical protein [detail] 821515
5.4 LIG6 DNA LIGASE 6 [detail] 842991
5.2 AT3G42630 Pentatricopeptide repeat (PPR) superfamily protein [detail] 823280
4.4 TTR1 Disease resistance protein (TIR-NBS-LRR class) [detail] 834536
Coexpressed
gene list		 [Coexpressed gene list for PTM]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 833475      
Refseq ID (protein) NP_001318674.1 
NP_198371.3 


The preparation time of this page was 0.2 [sec].