[←][→] ath   At5g38660 Gene
functional annotation
Function   acclimation of photosynthesis to environment      
GO BP
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (167 genes)  IEA  
GO:0009409 [list] [network] response to cold  (472 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001190435.1  NP_198682.3 
BLAST NP_001190435.1  NP_198682.3 
Orthologous [Ortholog page] LOC4345365 (osa)  LOC7494542 (ppo)  LOC18107396 (ppo)  LOC25495610 (mtr)  LOC100810571 (gma)  LOC101255370 (sly)  LOC103850127 (bra)  LOC123154793 (tae)  LOC123155894 (tae)  LOC123163859 (tae)  LOC123407002 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001190435.1)
chlo 9,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_198682.3)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001190435.1)
chlo 7  (predict for NP_198682.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
Genes directly connected with APE1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 ISPF isoprenoid F [detail] 842700
9.1 AT5G08650 Small GTP-binding protein [detail] 830766
9.1 PTAC4 plastid transcriptionally active 4 [detail] 842833
8.8 AT2G27290 FAM210B-like protein, putative (DUF1279) [detail] 817272
8.7 IMPL1 myo-inositol monophosphatase like 1 [detail] 840007
8.7 CcdA cytochrome c biogenesis protein family [detail] 835517
8.7 AT1G21065 secondary thiamine-phosphate synthase enzyme [detail] 838701
8.5 APG2 Sec-independent periplasmic protein translocase [detail] 814640
8.2 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein [detail] 815013
7.9 AT5G14970 seed maturation-like protein [detail] 831349
7.5 FdC2 2Fe-2S ferredoxin-like superfamily protein [detail] 840149
6.8 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 818877
6.5 NDC1 NAD(P)H dehydrogenase C1 [detail] 830775
Coexpressed
gene list		 [Coexpressed gene list for APE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249519_at
249519_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249519_at
249519_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249519_at
249519_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833856      
Refseq ID (protein) NP_001190435.1 
NP_198682.3 


The preparation time of this page was 0.1 [sec].