[←][→] ath   AT5G38660 Gene
functional annotation
Function   acclimation of photosynthesis to environment  
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
KEGG
Protein NP_001190435.1  NP_198682.3 
BLAST NP_001190435.1  NP_198682.3 
Orthologous [Ortholog page] LOC4345365 (osa)  LOC25495610 (mtr)  LOC100191267 (zma)  LOC100242947 (vvi)  LOC100810571 (gma)  LOC101255370 (sly)  LOC103850127 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001190435.1)
chlo 9,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_198682.3)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001190435.1)
chlo 7  (predict for NP_198682.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with APE1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 PTAC4 plastid transcriptionally active 4 [detail] 842833
8.2 AT5G08650 Small GTP-binding protein [detail] 830766
8.1 ISPF isoprenoid F [detail] 842700
8.0 AT1G54520 myelin-associated oligodendrocyte basic protein [detail] 841894
8.0 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain family protein [detail] 815013
7.7 AT1G78915 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 844230
7.4 APG2 Sec-independent periplasmic protein translocase [detail] 814640
7.3 FdC2 2Fe-2S ferredoxin-like superfamily protein [detail] 840149
7.2 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein [detail] 836426
7.0 IMPL1 myo-inositol monophosphatase like 1 [detail] 840007
6.4 AT5G14970 seed maturation-like protein [detail] 831349
6.4 NDC1 NAD(P)H dehydrogenase C1 [detail] 830775
6.3 CcdA cytochrome c biogenesis protein family [detail] 835517
Coexpressed
gene list		 [Coexpressed gene list for APE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249519_at
249519_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249519_at
249519_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249519_at
249519_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833856      
Refseq ID (protein) NP_001190435.1 
NP_198682.3 


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