[←][→] ath   AT5G38830 Gene
functional annotation
Function   Cysteinyl-tRNA synthetase, class Ia family protein  
GO BP
GO:0006423 [list] [network] cysteinyl-tRNA aminoacylation  (2 genes)  IBA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0004817 [list] [network] cysteine-tRNA ligase activity  (2 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (94 genes)
Protein NP_198699.1 
BLAST NP_198699.1 
Orthologous [Ortholog page] AT3G56300 (ath)  LOC7475579 (ppo)  LOC11431016 (mtr)  LOC100251639 (vvi)  LOC100777447 (gma)  LOC100812332 (gma)  LOC100854736 (vvi)  LOC101251377 (sly)  LOC103850130 (bra)  LOC103856987 (bra)  LOC103863802 (bra) 
Subcellular
localization
wolf
cysk 5,  cyto 2,  nucl 1,  chlo 1,  vacu 1,  nucl_plas 1  (predict for NP_198699.1)
Subcellular
localization
TargetP
other 9  (predict for NP_198699.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G38830 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT5G41770 crooked neck protein, putative / cell cycle protein [detail] 834182
6.0 AT1G18070 Translation elongation factor EF1A/initiation factor IF2gamma family protein [detail] 838387
6.0 AT1G22200 Endoplasmic reticulum vesicle transporter protein [detail] 838825
Coexpressed
gene list		 [Coexpressed gene list for AT5G38830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249537_at
249537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249537_at
249537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249537_at
249537_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833874      
Refseq ID (protein) NP_198699.1 


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