[←][→] ath   AT5G38890 Gene
functional annotation
Function   Nucleic acid-binding, OB-fold-like protein  
GO BP
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (13 genes)  IBA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_568559.2 
BLAST NP_568559.2 
Orthologous [Ortholog page] LOC4331133 (osa)  LOC25484620 (mtr)  LOC100281965 (zma)  LOC100796154 (gma)  LOC101246918 (sly)  LOC103831079 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_568559.2)
Subcellular
localization
TargetP
other 8  (predict for NP_568559.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03008 Ribosome biogenesis in eukaryotes 3
ath03020 RNA polymerase 2
Genes directly connected with AT5G38890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 WDR55 transducin family protein / WD-40 repeat family protein [detail] 817987
9.5 ATRPAC42 DNA-directed RNA polymerase family protein [detail] 842377
9.4 AT2G25355 PNAS-3-like protein [detail] 817074
8.1 AT1G08220 ATPase complex subunit [detail] 837343
Coexpressed
gene list		 [Coexpressed gene list for AT5G38890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249475_at
249475_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249475_at
249475_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249475_at
249475_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833880      
Refseq ID (protein) NP_568559.2 


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