[←][→] ath   AT5G39660 Gene
functional annotation
Function   cycling DOF factor 2  
GO BP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (36 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001318708.1  NP_568567.1  NP_851106.1 
BLAST NP_001318708.1  NP_568567.1  NP_851106.1 
Orthologous [Ortholog page] LOC778113 (gma)  LOC778120 (gma)  CDF3 (ath)  CDF1 (ath)  LOC4331765 (osa)  LOC4344326 (osa)  LOC4348585 (osa)  LOC7463038 (ppo)  LOC7495982 (ppo)  LOC11410541 (mtr)  LOC11412800 (mtr)  LOC11414470 (mtr)  LOC11416079 (mtr)  LOC11427755 (mtr)  LOC11445690 (mtr)  LOC25490407 (mtr)  LOC100193013 (zma)  LOC100254372 (vvi)  LOC100257057 (vvi)  LOC100265355 (vvi)  LOC100275567 (zma)  LOC100276261 (zma)  LOC100775201 (gma)  LOC100775675 (gma)  LOC100784308 (gma)  LOC100788246 (gma)  LOC100788247 (gma)  LOC100798021 (gma)  LOC100803454 (gma)  LOC100807731 (gma)  LOC100813315 (gma)  LOC100817354 (gma)  LOC101243956 (sly)  LOC101248009 (sly)  LOC101252243 (sly)  Dof22 (sly)  LOC101262001 (sly)  LOC103850147 (bra)  LOC103855006 (bra)  LOC103863905 (bra)  LOC103873236 (bra)  LOC103874677 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001318708.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_568567.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_851106.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318708.1)
other 7  (predict for NP_568567.1)
other 7  (predict for NP_851106.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
Genes directly connected with CDF2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.7 RVE1 Homeodomain-like superfamily protein [detail] 831595
10.1 AT3G12320 hypothetical protein [detail] 820411
9.1 CCA1 circadian clock associated 1 [detail] 819296
8.7 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 818724
7.8 ASG1 ATP-dependent DNA helicase [detail] 816944
7.1 RVE2 Homeodomain-like superfamily protein [detail] 833700
6.8 AT1G69570 Dof-type zinc finger DNA-binding family protein [detail] 843293
5.5 CPR5 CPR5 protein [detail] 836617
Coexpressed
gene list		 [Coexpressed gene list for CDF2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249415_at
249415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249415_at
249415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249415_at
249415_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833962      
Refseq ID (protein) NP_001318708.1 
NP_568567.1 
NP_851106.1 


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