ATTED-II : GeneID search result

[←][→] ath AT5G40440 Gene

functional annotation

Function

mitogen-activated protein kinase kinase 3

GO BP

GO:0009866 [list] [network] induced systemic resistance, ethylene mediated signaling pathway	(4 genes)	IEP
GO:0000187 [list] [network] activation of MAPK activity	(7 genes)	IBA
GO:0009864 [list] [network] induced systemic resistance, jasmonic acid mediated signaling pathway	(11 genes)	IEP
GO:0032147 [list] [network] activation of protein kinase activity	(55 genes)	IBA
GO:0023014 [list] [network] signal transduction by protein phosphorylation	(56 genes)	IBA
GO:0009814 [list] [network] defense response, incompatible interaction	(174 genes)	IMP
GO:0009738 [list] [network] abscisic acid-activated signaling pathway	(194 genes)	IMP
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IMP

GO CC

GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IBA IDA

GO MF

GO:0004708 [list] [network] MAP kinase kinase activity	(11 genes)	IBA IDA ISS
GO:0004707 [list] [network] MAP kinase activity	(22 genes)	IDA
GO:0004674 [list] [network] protein serine/threonine kinase activity	(801 genes)	IBA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

ath04016 [list] [network] MAPK signaling pathway - plant (134 genes)

Protein

NP_001318713.1 NP_001332249.1 NP_001332250.1 NP_001332251.1 NP_001332252.1 NP_198860.1

BLAST

NP_001318713.1 NP_001332249.1 NP_001332250.1 NP_001332251.1 NP_001332252.1 NP_198860.1

Orthologous

[Ortholog page] LOC7487872 (ppo) LOC9267453 (osa) LOC11418727 (mtr) LOC100194228 (zma) LOC100257776 (vvi) LOC100784935 (gma) LOC100820176 (gma) LOC101252056 (sly) LOC103863991 (bra)

Subcellular
localization
wolf

cyto 6, nucl 4	(predict for NP_001318713.1)
chlo 6, chlo_mito 4, nucl 2	(predict for NP_001332249.1)
chlo 3, vacu 2, nucl 1, plas 1, E.R. 1, chlo_mito 1, nucl_plas 1, E.R._plas 1	(predict for NP_001332250.1)
chlo 3, vacu 2, nucl 1, plas 1, E.R. 1, chlo_mito 1, nucl_plas 1, E.R._plas 1	(predict for NP_001332251.1)
chlo 3, vacu 2, nucl 1, plas 1, E.R. 1, chlo_mito 1, nucl_plas 1, E.R._plas 1	(predict for NP_001332252.1)
cyto 6, nucl 4	(predict for NP_198860.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001318713.1)
mito 5	(predict for NP_001332249.1)
scret 8	(predict for NP_001332250.1)
scret 8	(predict for NP_001332251.1)
scret 8	(predict for NP_001332252.1)
other 8	(predict for NP_198860.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

Genes directly connected with MKK3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.6	AT5G44150	phosphorelay protein	[detail]	834438
6.0	TAF5	TBP-associated factor 5	[detail]	832586
6.0	AT4G09340	SPla/RYanodine receptor (SPRY) domain-containing protein	[detail]	826516
5.8	MGT3	magnesium transporter 3	[detail]	814891
5.7	AT1G73970	obscurin-like protein	[detail]	843735
5.4	SSE1	shrunken seed protein (SSE1)	[detail]	819177
4.7	KMS2	vacuole membrane-like protein	[detail]	837035

Coexpressed
gene list

[Coexpressed gene list for MKK3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249351_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249351_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249351_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834042
Refseq ID (protein)	NP_001318713.1
	NP_001332249.1
	NP_001332250.1
	NP_001332251.1
	NP_001332252.1
	NP_198860.1

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