| functional annotation |
| Function |
hydroxyproline-rich glycoprotein family protein |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0009863 [list] [network] salicylic acid mediated signaling pathway
|
(77 genes)
|
IEA
|
 |
|
GO:0002682 [list] [network] regulation of immune system process
|
(184 genes)
|
IEA
|
|
|
GO:0010200 [list] [network] response to chitin
|
(304 genes)
|
IEA
|
|
|
GO:0009409 [list] [network] response to cold
|
(472 genes)
|
IEA
|
|
|
GO:0009753 [list] [network] response to jasmonic acid
|
(611 genes)
|
IEA
|
|
|
GO:0050832 [list] [network] defense response to fungus
|
(705 genes)
|
IEA
|
|
|
GO:0031347 [list] [network] regulation of defense response
|
(749 genes)
|
IEA
|
|
|
GO:0009611 [list] [network] response to wounding
|
(816 genes)
|
IEA
|
|
|
GO:0048522 [list] [network] positive regulation of cellular process
|
(856 genes)
|
IEA
|
|
|
GO:0009755 [list] [network] hormone-mediated signaling pathway
|
(904 genes)
|
IEA
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(980 genes)
|
IEA
|
|
|
GO:0033993 [list] [network] response to lipid
|
(1939 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0005737 [list] [network] cytoplasm
|
(13880 genes)
|
ISM
|
|
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_198926.2
NP_851112.1
|
| BLAST |
NP_198926.2
NP_851112.1
|
| Orthologous |
[Ortholog page]
LOC103864054 (bra)
|
Subcellular
localization
wolf |
|
chlo 4,
nucl 3,
mito 1,
cyto_mito 1,
plas 1,
cysk 1,
cysk_plas 1
|
(predict for NP_198926.2)
|
|
chlo 4,
nucl 3,
mito 1,
cyto_mito 1,
plas 1,
cysk 1,
cysk_plas 1
|
(predict for NP_851112.1)
|
|
Subcellular
localization
TargetP |
|
mito 5,
other 3
|
(predict for NP_198926.2)
|
|
mito 5,
other 3
|
(predict for NP_851112.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04626 |
Plant-pathogen interaction |
2 |
 |
Genes directly connected with AT5G41100 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 14.8 |
AT3G26910 |
hydroxyproline-rich glycoprotein family protein |
[detail] |
822307 |
| 10.6 |
CAD1 |
MAC/Perforin domain-containing protein |
[detail] |
839846 |
| 8.9 |
AT1G59910 |
Actin-binding FH2 (formin homology 2) family protein |
[detail] |
842285 |
| 6.9 |
ATSIK |
Protein kinase superfamily protein |
[detail] |
820023 |
| 6.8 |
AT5G22690 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
832332 |
| 6.8 |
AT1G28280 |
VQ motif-containing protein |
[detail] |
839722 |
| 6.7 |
PBRP |
plant-specific TFIIB-related protein |
[detail] |
829817 |
| 6.3 |
WRKY15 |
WRKY DNA-binding protein 15 |
[detail] |
816864 |
| 5.9 |
WAKL2 |
wall associated kinase-like 2 |
[detail] |
838182 |
| 5.0 |
AT1G67530 |
ARM repeat superfamily protein |
[detail] |
843074 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT5G41100]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
249339_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
249339_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
249339_at
X axis is samples (xls file), and Y axis is log-expression.
|
At5g41100 Gene
