[←][→] ath   At5g41190 Gene
functional annotation
Function   RNA-binding NOB1-like protein      
GO BP
GO:0000469 [list] [network] cleavage involved in rRNA processing  (2 genes)  IDA  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0004521 [list] [network] endoribonuclease activity  (82 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_198935.1 
BLAST NP_198935.1 
Orthologous [Ortholog page] LOC4328064 (osa)  LOC7465848 (ppo)  LOC11435776 (mtr)  LOC100785714 (gma)  LOC100800291 (gma)  LOC101252008 (sly)  LOC103850212 (bra)  LOC103864065 (bra)  LOC123131736 (tae)  LOC123135589 (tae)  LOC123143155 (tae)  LOC123401517 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 1,  pero 1,  mito_plas 1  (predict for NP_198935.1)
Subcellular
localization
TargetP
other 8  (predict for NP_198935.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with AT5G41190 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.0 AT5G14050 Transducin/WD40 repeat-like superfamily protein [detail] 831254
11.9 AT5G15810 tRNA (guanine(26)-N(2))-dimethyltransferase [detail] 831438
11.9 EIF3B-2 eukaryotic translation initiation factor 3B-2 [detail] 832647
11.6 AT4G34910 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 829643
10.8 ECT3 evolutionarily conserved C-terminal region 3 [detail] 836223
10.5 AtNug2 GTP-binding family protein [detail] 841731
9.3 AT5G24840 tRNA (guanine-N-7) methyltransferase [detail] 832553
9.3 PUM23 pumilio 23 [detail] 843564
7.9 RBP47C' RNA-binding protein 47C' [detail] 841159
7.6 MTA mRNAadenosine methylase [detail] 826670
6.9 ROS3 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835925
6.7 AT5G43720 rRNA-processing EFG1-like protein (DUF2361) [detail] 834392
6.3 AT4G00238 DNA-binding storekeeper protein-related transcriptional regulator [detail] 825892
Coexpressed
gene list		 [Coexpressed gene list for AT5G41190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249315_at
249315_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249315_at
249315_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249315_at
249315_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834121      
Refseq ID (protein) NP_198935.1 


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