[←][→] ath   AT5G42140 Gene
functional annotation
Function   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein  
GO BP
GO:0007165 [list] [network] signal transduction  (1575 genes)  ISS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0035091 [list] [network] phosphatidylinositol binding  (78 genes)  ISS  
KEGG
Protein NP_001318728.1  NP_001330926.1 
BLAST NP_001318728.1  NP_001330926.1 
Orthologous [Ortholog page] PRAF1 (ath)  LOC4324462 (osa)  LOC4337567 (osa)  LOC7467827 (ppo)  LOC7469211 (ppo)  LOC11420473 (mtr)  LOC25496065 (mtr)  LOC100246114 (vvi)  LOC100381412 (zma)  LOC100783270 (gma)  LOC100805364 (gma)  LOC100811999 (gma)  LOC101260719 (sly)  LOC103636262 (zma)  LOC103830587 (bra)  LOC103831580 (bra)  LOC103832150 (bra) 
Subcellular
localization
wolf
nucl 5,  E.R. 3,  cyto_nucl 3  (predict for NP_001318728.1)
nucl 5,  E.R. 3,  cyto_nucl 3  (predict for NP_001330926.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318728.1)
other 7  (predict for NP_001330926.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with AT5G42140 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 5PTASE13 Endonuclease/exonuclease/phosphatase family protein [detail] 837069
5.3 AT5G23520 smr (Small MutS Related) domain-containing protein [detail] 832417
4.9 ACA2 calcium ATPase 2 [detail] 829918
Coexpressed
gene list		 [Coexpressed gene list for AT5G42140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249225_at
249225_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249225_at
249225_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249225_at
249225_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834219      
Refseq ID (protein) NP_001318728.1 
NP_001330926.1 


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