[←][→] ath   At5g42450 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein      
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001331814.1  NP_199060.3 
BLAST NP_001331814.1  NP_199060.3 
Orthologous [Ortholog page] LOC4327383 (osa)  LOC7491943 (ppo)  LOC25488563 (mtr)  LOC100804272 (gma)  LOC103848549 (bra)  LOC104649097 (sly)  LOC123062533 (tae)  LOC123065904 (tae)  LOC123079689 (tae)  LOC123444938 (hvu) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001331814.1)
chlo 5,  chlo_mito 4,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_199060.3)
Subcellular
localization
TargetP
mito 6  (predict for NP_001331814.1)
mito 7  (predict for NP_199060.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G42450 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.4 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833931
12.4 AT5G15300 Pentatricopeptide repeat (PPR) superfamily protein [detail] 831382
11.7 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837901
10.5 AT5G56310 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835730
10.4 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837439
10.1 AT5G37570 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 833735
9.8 AT3G14580 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820684
8.7 MEF20 mitochondrial editing factor 20 [detail] 821430
Coexpressed
gene list		 [Coexpressed gene list for AT5G42450]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249222_at
249222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249222_at
249222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249222_at
249222_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834252      
Refseq ID (protein) NP_001331814.1 
NP_199060.3 


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