[←][→] ath   AT5G42790 Gene
functional annotation
Function   proteasome alpha subunit F1  
GO BP
GO:0046685 [list] [network] response to arsenic-containing substance  (14 genes)  IMP  
GO:0010499 [list] [network] proteasomal ubiquitin-independent protein catabolic process  (18 genes)  IBA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO:0010498 [list] [network] proteasomal protein catabolic process  (203 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0030163 [list] [network] protein catabolic process  (603 genes)  ISS  
GO CC
GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex  (13 genes)  IBA  
GO:0005839 [list] [network] proteasome core complex  (24 genes)  IBA TAS  
GO:0000502 [list] [network] proteasome complex  (80 genes)  IDA ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (23 genes)  IEA  
GO:0004175 [list] [network] endopeptidase activity  (308 genes)  IBA  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_199093.1 
BLAST NP_199093.1 
Orthologous [Ortholog page] PAF2 (ath)  LOC4328215 (osa)  LOC7471943 (ppo)  LOC7477623 (ppo)  LOC25482164 (mtr)  LOC100257364 (vvi)  LOC100282706 (zma)  LOC100792921 (gma)  LOC100797380 (gma)  LOC100819051 (gma)  LOC100856965 (zma)  LOC101266633 (sly)  LOC103833084 (bra)  LOC103839280 (bra)  LOC103848568 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  cysk_nucl 2,  chlo 1  (predict for NP_199093.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_199093.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 21
Genes directly connected with PAF1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.7 AT5G23540 Mov34/MPN/PAD-1 family protein [detail] 832420
11.1 PBB2 20S proteasome beta subunit PBB2 [detail] 834056
10.5 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [detail] 829257
9.4 PBD1 20S proteasome beta subunit D1 [detail] 821834
8.9 RPN8A RP non-ATPase subunit 8A [detail] 830463
8.5 PAF2 20S proteasome alpha subunit F2 [detail] 841128
Coexpressed
gene list		 [Coexpressed gene list for PAF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249161_at
249161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249161_at
249161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249161_at
249161_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834290      
Refseq ID (protein) NP_199093.1 


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