[←][→] ath   AT5G43560 Gene
functional annotation
Function   TRAF-like superfamily protein  
GO BP
GO:1905037 [list] [network] autophagosome organization  (21 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (322 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0043424 [list] [network] protein histidine kinase binding  (22 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_199169.1  NP_851125.1 
BLAST NP_199169.1  NP_851125.1 
Orthologous [Ortholog page] AT5G52330 (ath)  AT1G04300 (ath)  LOC9269535 (osa)  LOC11434467 (mtr)  LOC25484396 (mtr)  LOC25484397 (mtr)  LOC100247786 (vvi)  LOC100502244 (zma)  LOC100784393 (gma)  LOC100799509 (gma)  LOC100818052 (gma)  LOC100820160 (gma)  LOC101251685 (sly)  LOC101260404 (sly)  LOC101267449 (sly)  LOC103640538 (zma)  LOC103645037 (zma)  LOC103836582 (bra)  LOC103840147 (bra)  LOC103843660 (bra)  LOC103844271 (bra)  LOC113002616 (sly) 
Subcellular
localization
wolf
nucl 10  (predict for NP_199169.1)
nucl 10  (predict for NP_851125.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_199169.1)
other 6,  chlo 5  (predict for NP_851125.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G43560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 AT1G04300 TRAF-like superfamily protein [detail] 839551
7.7 ALY3 DNA binding protein [detail] 821697
7.6 AT3G05670 RING/U-box protein [detail] 819734
6.8 AT3G49490 hypothetical protein [detail] 824111
6.7 AT2G32910 DCD (Development and Cell Death) domain protein [detail] 817853
Coexpressed
gene list		 [Coexpressed gene list for AT5G43560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249100_at
249100_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249100_at
249100_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249100_at
249100_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834376      
Refseq ID (protein) NP_199169.1 
NP_851125.1 


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