[←][→] ath   At5g44180 Gene
functional annotation
Function   Homeodomain-like transcriptional regulator    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (46 genes)  IEA  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IGI  
GO CC
GO:0031010 [list] [network] ISWI-type complex  (14 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190470.1  NP_001318738.1  NP_199231.1 
BLAST NP_001190470.1  NP_001318738.1  NP_199231.1 
Orthologous [Ortholog page] HB-1 (ath)  LOC4325898 (osa)  LOC4339610 (osa)  LOC7476373 (ppo)  LOC7491716 (ppo)  LOC11439750 (mtr)  LOC11441271 (mtr)  LOC18103066 (ppo)  LOC18106807 (ppo)  LOC25493092 (mtr)  LOC100777465 (gma)  LOC100784945 (gma)  LOC100797480 (gma)  LOC100818817 (gma)  LOC101253299 (sly)  LOC101262772 (sly)  LOC103827923 (bra)  LOC103835318 (bra)  LOC103838952 (bra)  LOC123061706 (tae)  LOC123068155 (tae)  LOC123070323 (tae)  LOC123078782 (tae)  LOC123145755 (tae)  LOC123183086 (tae)  LOC123444072 (hvu)  LOC123450209 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001190470.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001318738.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_199231.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190470.1)
other 9  (predict for NP_001318738.1)
other 9  (predict for NP_199231.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with RLT2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.9 CHR5 chromatin remodeling 5 [detail] 815823
8.6 CHR4 chromatin remodeling 4 [detail] 834510
8.5 SDG2 SET domain protein 2 [detail] 827183
5.7 ALY2 ALWAYS EARLY 2 [detail] 819702
5.4 AT1G26620 T-box transcription factor, putative (DUF863) [detail] 839202
4.8 ATM1 myosin 1 [detail] 821534
Coexpressed
gene list		 [Coexpressed gene list for RLT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249086_at
249086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249086_at
249086_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249086_at
249086_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834441      
Refseq ID (protein) NP_001190470.1 
NP_001318738.1 
NP_199231.1 


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