[←][→] ath   At5g44500 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein  
GO BP
GO:0016441 [list] [network] post-transcriptional gene silencing  (105 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001032011.1  NP_199263.1 
BLAST NP_001032011.1  NP_199263.1 
Orthologous [Ortholog page] smB (ath)  LOC9270807 (osa)  LOC11431976 (mtr)  LOC18095770 (ppo)  LOC25501710 (mtr)  LOC100780500 (gma)  LOC100786807 (gma)  LOC101262959 (sly)  LOC103834168 (bra)  LOC103858296 (bra)  LOC123045027 (tae)  LOC123052809 (tae)  LOC123188677 (tae)  LOC123426167 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto 2,  cyto_nucl 2  (predict for NP_001032011.1)
mito 4,  chlo 3,  cyto 2,  cyto_nucl 2  (predict for NP_199263.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001032011.1)
mito 3  (predict for NP_199263.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 5
ath03010 Ribosome 3
Genes directly connected with AT5G44500 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.8 smB small nuclear ribonucleoprotein associated protein B [detail] 827792
6.5 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein [detail] 828071
6.0 AT5G02850 hydroxyproline-rich glycoprotein family protein [detail] 831762
Coexpressed
gene list		 [Coexpressed gene list for AT5G44500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249003_at
249003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249003_at
249003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249003_at
249003_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834477      
Refseq ID (protein) NP_001032011.1 
NP_199263.1 


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