[←][→] ath   At5g44560 Gene
functional annotation
Function   SNF7 family protein      
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (261 genes)  ISS  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (9 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_001119371.1  NP_001332586.1  NP_001332587.1  NP_199269.1 
BLAST NP_001119371.1  NP_001332586.1  NP_001332587.1  NP_199269.1 
Orthologous [Ortholog page] LOC4333538 (osa)  LOC7490692 (ppo)  LOC25486687 (mtr)  LOC100777179 (gma)  LOC100793101 (gma)  LOC103827890 (bra)  LOC103834159 (bra)  LOC103839171 (bra)  LOC104645908 (sly)  LOC123104925 (tae)  LOC123113226 (tae)  LOC123122735 (tae)  LOC123452125 (hvu) 
Subcellular
localization
wolf
mito 4,  nucl 2,  cyto_mito 2,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001119371.1)
cyto_nucl 4,  nucl 4,  nucl_plas 4,  plas 2,  cyto 1,  chlo 1  (predict for NP_001332586.1)
cyto_nucl 5,  cyto 5,  nucl 3,  cysk_nucl 2  (predict for NP_001332587.1)
nucl 3,  mito 3,  nucl_plas 3,  chlo 1,  plas 1,  cyto_mito 1  (predict for NP_199269.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_001119371.1)
other 6  (predict for NP_001332586.1)
other 6  (predict for NP_001332587.1)
other 6  (predict for NP_199269.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VPS2.2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 SYP111 syntaxin of plants 111 [detail] 837378
10.2 AT4G02800 GRIP/coiled-coil protein [detail] 828171
9.7 AT3G14190 uncharacterized protein [detail] 820636
5.1 AT4G20430 Subtilase family protein [detail] 827791
Coexpressed
gene list		 [Coexpressed gene list for VPS2.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249060_at
249060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249060_at
249060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249060_at
249060_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834483      
Refseq ID (protein) NP_001119371.1 
NP_001332586.1 
NP_001332587.1 
NP_199269.1 


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