[←][→] ath   AT5G46030 Gene
functional annotation
Function   transcription elongation factor-like protein  
GO BP
GO:0048096 [list] [network] chromatin-mediated maintenance of transcription  (1 genes)  IBA  
GO:0006368 [list] [network] transcription elongation from RNA polymerase II promoter  (12 genes)  IBA  
GO CC
GO:0008023 [list] [network] transcription elongation factor complex  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (18 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001330049.1  NP_001330050.1  NP_568654.1 
BLAST NP_001330049.1  NP_001330050.1  NP_568654.1 
Orthologous [Ortholog page] LOC4328219 (osa)  LOC4343996 (osa)  LOC25493060 (mtr)  LOC100246889 (vvi)  LOC100253769 (vvi)  LOC100778262 (gma)  LOC100781562 (gma)  LOC101252629 (sly)  LOC101268159 (sly)  LOC103654002 (zma)  LOC103827760 (bra)  LOC103853681 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  extr 2,  chlo 1  (predict for NP_001330049.1)
cyto 4,  nucl 2,  extr 2,  chlo 1  (predict for NP_001330050.1)
cyto 4,  nucl 2,  extr 2,  chlo 1  (predict for NP_568654.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001330049.1)
other 5,  mito 4  (predict for NP_001330050.1)
other 5,  mito 4  (predict for NP_568654.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
ath03020 RNA polymerase 2
Genes directly connected with AT5G46030 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT1G16810 7-dehydrocholesterol reductase-like protein [detail] 838252
6.8 PFD6 prefoldin 6 [detail] 839878
6.7 NRPB6A RNA polymerase Rpb6 [detail] 835269
5.2 ATTRX4 Thioredoxin superfamily protein [detail] 838562
Coexpressed
gene list		 [Coexpressed gene list for AT5G46030]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248884_at
248884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248884_at
248884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248884_at
248884_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834644      
Refseq ID (protein) NP_001330049.1 
NP_001330050.1 
NP_568654.1 


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