[←][→] ath   At5g47010 Gene
functional annotation
Function   RNA helicase      
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (7 genes)  IGI IMP  
GO:0048571 [list] [network] long-day photoperiodism  (29 genes)  IMP  
GO:0010182 [list] [network] sugar mediated signaling pathway  (38 genes)  IMP  
GO:0009744 [list] [network] response to sucrose  (74 genes)  IGI  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (77 genes)  IMP  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (147 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (816 genes)  IMP  
GO:0006412 [list] [network] translation  (911 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0000932 [list] [network] P-body  (32 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA RCA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (103 genes)
ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_199512.2 
BLAST NP_199512.2 
Orthologous [Ortholog page] LOC4343292 (osa)  LOC11438910 (mtr)  LOC18094225 (ppo)  LOC18096919 (ppo)  LOC100793750 (gma)  LOC100795594 (gma)  LOC101257199 (sly)  LOC101258879 (sly)  LOC103853766 (bra)  LOC123044827 (tae)  LOC123052735 (tae)  LOC123188489 (tae)  LOC123426134 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_199512.2)
Subcellular
localization
TargetP
other 9  (predict for NP_199512.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with LBA1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 KAK HECT ubiquitin protein ligase family protein KAK [detail] 830017
9.9 NRPB1 RNA polymerase II large subunit [detail] 829734
9.2 GCT RNA polymerase II transcription mediator [detail] 841978
8.8 DCP5 decapping 5 [detail] 839152
8.6 SMG7 Telomerase activating protein Est1 [detail] 832060
7.9 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein [detail] 831941
7.7 AT3G58560 DNAse I-like superfamily protein [detail] 825025
7.3 CPL1 C-terminal domain phosphatase-like 1 [detail] 828254
7.2 TPR2 TOPLESS-related 2 [detail] 820936
7.2 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819079
Coexpressed
gene list		 [Coexpressed gene list for LBA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248816_at
248816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248816_at
248816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248816_at
248816_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834747      
Refseq ID (protein) NP_199512.2 


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