[←][→] ath   AT5G47430 Gene
functional annotation
Function   DWNN domain, a CCHC-type zinc finger  
GO BP
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG
Protein NP_001078725.1  NP_001190484.1  NP_001330703.1  NP_001330704.1  NP_001330705.1  NP_199554.2 
BLAST NP_001078725.1  NP_001190484.1  NP_001330703.1  NP_001330704.1  NP_001330705.1  NP_199554.2 
Orthologous [Ortholog page] AT4G17410 (ath)  LOC4348695 (osa)  LOC11406899 (mtr)  LOC11411312 (mtr)  LOC11424069 (mtr)  LOC11430926 (mtr)  LOC100798536 (gma)  LOC100808703 (gma)  LOC100854867 (vvi)  LOC101251343 (sly)  LOC103643542 (zma)  LOC103839528 (bra)  LOC103868196 (bra) 
Subcellular
localization
wolf
nucl 5,  mito 3,  chlo 2  (predict for NP_001078725.1)
nucl 9  (predict for NP_001190484.1)
nucl 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001330703.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001330704.1)
nucl 6,  chlo 2,  cyto 1  (predict for NP_001330705.1)
nucl 9  (predict for NP_199554.2)
Subcellular
localization
TargetP
mito 7  (predict for NP_001078725.1)
other 8  (predict for NP_001190484.1)
other 8  (predict for NP_001330703.1)
scret 5,  mito 5  (predict for NP_001330704.1)
scret 5,  mito 5  (predict for NP_001330705.1)
other 8  (predict for NP_199554.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT5G47430 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT4G17410 DWNN domain, a CCHC-type zinc finger [detail] 827452
6.6 AT5G11430 SPOC domain / Transcription elongation factor S-II protein [detail] 831014
6.6 FIP1[V] FIP1[V]-like protein [detail] 835916
Coexpressed
gene list		 [Coexpressed gene list for AT5G47430]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248788_at
248788_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248788_at
248788_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248788_at
248788_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834790      
Refseq ID (protein) NP_001078725.1 
NP_001190484.1 
NP_001330703.1 
NP_001330704.1 
NP_001330705.1 
NP_199554.2 


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