[←][→] ath   AT5G47970 Gene
functional annotation
Function   Aldolase-type TIM barrel family protein  
GO BP
GO:0002943 [list] [network] tRNA dihydrouridine synthesis  (2 genes)  IEA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009524 [list] [network] phragmoplast  (89 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (5 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (147 genes)  IEA  
KEGG
Protein NP_001078731.1  NP_001331912.1  NP_199608.1 
BLAST NP_001078731.1  NP_001331912.1  NP_199608.1 
Orthologous [Ortholog page] AT3G63510 (ath)  LOC4335364 (osa)  LOC7482287 (ppo)  LOC11428385 (mtr)  LOC25491953 (mtr)  LOC100248175 (vvi)  LOC100273106 (zma)  LOC100779457 (gma)  LOC100785422 (gma)  LOC101247957 (sly)  LOC101248235 (sly)  LOC103831645 (bra)  LOC103874921 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 2,  cysk 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001078731.1)
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2  (predict for NP_001331912.1)
chlo 5,  cyto 2,  cysk 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_199608.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078731.1)
other 8  (predict for NP_001331912.1)
other 8  (predict for NP_199608.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with AT5G47970 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 HRB1 Drought-responsive family protein [detail] 834983
4.8 ATNTH1 DNA glycosylase superfamily protein [detail] 817703
4.8 AT1G68080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 843136
Coexpressed
gene list		 [Coexpressed gene list for AT5G47970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248724_at
248724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248724_at
248724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248724_at
248724_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834848      
Refseq ID (protein) NP_001078731.1 
NP_001331912.1 
NP_199608.1 


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