[←][→] ath   At5g48870 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO CC
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1729 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_199698.1 
BLAST NP_199698.1 
Orthologous [Ortholog page] LOC4338670 (osa)  LOC7463897 (ppo)  LOC25493392 (mtr)  LOC100527929 (gma)  LOC101256523 (sly)  LOC103837268 (bra)  LOC103854566 (bra)  LOC123054276 (tae)  LOC123092587 (tae)  LOC123181869 (tae)  LOC123439740 (hvu) 
Subcellular
localization
wolf
cyto 6,  extr 3,  cyto_nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_199698.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199698.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03040 Spliceosome 4
ath03018 RNA degradation 3
Genes directly connected with SAD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT5G41685 Mitochondrial outer membrane translocase complex, subunit Tom7 [detail] 834171
7.7 LSM6A Small nuclear ribonucleoprotein family protein [detail] 825150
7.7 AT4G29390 Ribosomal protein S30 family protein [detail] 829060
6.0 AT5G59410 Rab5-interacting family protein [detail] 836060
Coexpressed
gene list		 [Coexpressed gene list for SAD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248678_at
248678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248678_at
248678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248678_at
248678_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834945      
Refseq ID (protein) NP_199698.1 


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