[←][→] ath   AT5G49530 Gene
functional annotation
Function   SIN-like family protein  
GO BP
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001056 [list] [network] RNA polymerase III activity  (24 genes)  IBA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_199764.1 
BLAST NP_199764.1 
Orthologous [Ortholog page] LOC7478022 (ppo)  LOC9268125 (osa)  LOC11409562 (mtr)  LOC11410622 (mtr)  LOC100247859 (vvi)  LOC100780965 (gma)  LOC101252245 (sly)  LOC101256904 (sly)  LOC103629388 (zma)  LOC103653271 (zma)  LOC103874616 (bra)  LOC108870805 (bra)  LOC112421787 (mtr) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_199764.1)
Subcellular
localization
TargetP
other 9  (predict for NP_199764.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 2
Genes directly connected with AT5G49530 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 PRP40C pre-mRNA-processing protein 40C [detail] 821521
5.6 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 825515
5.6 FAS4 RNA helicase family protein [detail] 840232
Coexpressed
gene list		 [Coexpressed gene list for AT5G49530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248612_at
248612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248612_at
248612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248612_at
248612_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835014      
Refseq ID (protein) NP_199764.1 


The preparation time of this page was 0.1 [sec].