[←][→] ath   At5g49530 Gene
functional annotation
Function   SIN-like family protein      
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (159 genes)  IEA  
GO:0008104 [list] [network] protein localization  (419 genes)  IEA  
GO:0009908 [list] [network] flower development  (492 genes)  IEA  
GO:2000026 [list] [network] regulation of multicellular organismal development  (499 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
Protein NP_199764.1 
BLAST NP_199764.1 
Orthologous [Ortholog page] LOC7478022 (ppo)  LOC9268125 (osa)  LOC11409562 (mtr)  LOC11410622 (mtr)  LOC100780965 (gma)  LOC101252245 (sly)  LOC101256904 (sly)  LOC103874616 (bra)  LOC108870805 (bra)  LOC123128905 (tae)  LOC123134949 (tae)  LOC123147886 (tae)  LOC123159532 (tae)  LOC123165063 (tae)  LOC123407460 (hvu)  LOC123440346 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_199764.1)
Subcellular
localization
TargetP
other 9  (predict for NP_199764.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03020 RNA polymerase 3
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT5G49530 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 RPAC43 RNA polymerase I subunit 43 [detail] 842356
5.9 FAS4 RNA helicase family protein [detail] 840232
5.6 PRP40C pre-mRNA-processing protein 40C [detail] 821521
Coexpressed
gene list		 [Coexpressed gene list for AT5G49530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248612_at
248612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248612_at
248612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248612_at
248612_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835014      
Refseq ID (protein) NP_199764.1 


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