[←][→] ath   AT5G49890 Gene
functional annotation
Function   chloride channel C  
GO BP
GO:0034765 [list] [network] regulation of ion transmembrane transport  (43 genes)  IEA  
GO CC
GO:0034707 [list] [network] chloride channel complex  (8 genes)  IEA  
GO:0009705 [list] [network] plant-type vacuole membrane  (124 genes)  IBA IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19648 genes)  IBA  
GO:0005622 [list] [network] intracellular  (21658 genes)  TAS  
GO MF
GO:0005247 [list] [network] voltage-gated chloride channel activity  (8 genes)  IEA  
GO:0015108 [list] [network] chloride transmembrane transporter activity  (13 genes)  IBA  
GO:0005253 [list] [network] anion channel activity  (20 genes)  ISS  
GO:0022857 [list] [network] transmembrane transporter activity  (1151 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_199800.1 
BLAST NP_199800.1 
Orthologous [Ortholog page] LOC542114 (zma)  LOC4329678 (osa)  LOC9267520 (osa)  LOC11412647 (mtr)  LOC11433847 (mtr)  LOC25494376 (mtr)  LOC100245380 (vvi)  LOC100259734 (vvi)  LOC100384199 (zma)  LOC100502544 (zma)  LOC100777170 (gma)  LOC100809070 (gma)  LOC101258791 (sly)  LOC101262869 (sly)  LOC103852202 (bra)  LOC103858420 (bra)  LOC107279829 (osa) 
Subcellular
localization
wolf
plas 6,  vacu 2,  E.R. 1  (predict for NP_199800.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199800.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath04145 Phagosome 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00052 Galactose metabolism 2
ath00500 Starch and sucrose metabolism 2
Genes directly connected with CLC-C on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 HXK1 hexokinase 1 [detail] 829034
5.1 CAT4 cationic amino acid transporter 4 [detail] 821176
5.0 VHA-A3 vacuolar proton ATPase A3 [detail] 830063
Coexpressed
gene list		 [Coexpressed gene list for CLC-C]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248580_at
248580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248580_at
248580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248580_at
248580_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835052      
Refseq ID (protein) NP_199800.1 


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