[←][→] ath   AT5G49930 Gene
functional annotation
Function   zinc knuckle (CCHC-type) family protein  
GO BP
GO:1990116 [list] [network] ribosome-associated ubiquitin-dependent protein catabolic process  (2 genes)  IBA  
GO:0072344 [list] [network] rescue of stalled ribosome  (5 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:1990112 [list] [network] RQC complex  (2 genes)  IBA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (9 genes)  IBA  
GO:0000049 [list] [network] tRNA binding  (23 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_199804.1 
BLAST NP_199804.1 
Orthologous [Ortholog page] LOC4352539 (osa)  LOC7471088 (ppo)  LOC100267050 (vvi)  LOC100803745 (gma)  LOC100807437 (gma)  LOC101247552 (sly)  LOC103650540 (zma)  LOC103858423 (bra)  LOC112419084 (mtr) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_199804.1)
Subcellular
localization
TargetP
other 6  (predict for NP_199804.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with emb1441 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.6 AT2G39260 regulator of nonsense transcripts UPF2 [detail] 818511
8.3 GTA2 global transcription factor group A2 [detail] 826391
7.9 THO2 THO2 [detail] 839081
5.5 AT1G52320 kinesin-like protein [detail] 841662
Coexpressed
gene list		 [Coexpressed gene list for emb1441]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248583_at
248583_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248583_at
248583_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248583_at
248583_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835056      
Refseq ID (protein) NP_199804.1 


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