ATTED-II : GeneID search result

[←][→] ath At5g50020 Gene

functional annotation

Function

DHHC-type zinc finger family protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

KEGG

Protein

NP_001190503.1 NP_001330558.1 NP_199813.2

BLAST

NP_001190503.1 NP_001330558.1 NP_199813.2

Orthologous

[Ortholog page] AT4G24630 (ath) LOC4325051 (osa) LOC4338902 (osa) LOC7456284 (ppo) LOC7467803 (ppo) LOC7492478 (ppo) LOC11419453 (mtr) LOC25496180 (mtr) LOC100795934 (gma) LOC100805189 (gma) LOC100818705 (gma) LOC100820208 (gma) LOC101252481 (sly) LOC103834900 (bra) LOC103858429 (bra) LOC103862354 (bra) LOC123057251 (tae) LOC123134711 (tae) LOC123182147 (tae) LOC123446591 (hvu)

Subcellular
localization
wolf

cyto 5, cysk 2, nucl 1, E.R. 1, golg 1, nucl_plas 1	(predict for NP_001190503.1)
cyto 6, chlo 3	(predict for NP_001330558.1)
cyto 5, chlo 4, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_199813.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001190503.1)
other 8, mito 4	(predict for NP_001330558.1)
other 8, mito 4	(predict for NP_199813.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

Genes directly connected with AT5G50020 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.9	AT3G26935	DHHC-type zinc finger family protein	[detail]	822311
5.9	AT1G74510	Galactose oxidase/kelch repeat superfamily protein	[detail]	843792
5.4	EML3	Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein	[detail]	831142

Coexpressed
gene list

[Coexpressed gene list for AT5G50020]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248533_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248533_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248533_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835066
Refseq ID (protein)	NP_001190503.1
	NP_001330558.1
	NP_199813.2

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