[][] ath   At5g50280 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
KEGG
Protein NP_199839.1 
BLAST NP_199839.1 
Orthologous [Ortholog page] LOC4338318 (osa)LOC7484442 (ppo)LOC11432071 (mtr)LOC100775643 (gma)LOC100788628 (gma)LOC100810527 (gma)LOC101255679 (sly)LOC103858442 (bra)LOC123045257 (tae)LOC123053090 (tae)LOC123188998 (tae)LOC123426476 (hvu)
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for NP_199839.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_199839.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB1006 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 AT5G14460 Pseudouridine synthase family protein [detail] 831297
8.3 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833995
8.2 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829206
8.0 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820653
6.8 EMB175 Pentatricopeptide repeat (PPR) superfamily protein [detail] 831717
Coexpressed
gene list
[Coexpressed gene list for EMB1006]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248547_at
248547_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248547_at
248547_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248547_at
248547_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835093    
Refseq ID (protein) NP_199839.1 


The preparation time of this page was 0.5 [sec].