[←][→] ath   At5g50375 Gene
functional annotation
Function   cyclopropyl isomerase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006907 [list] [network] pinocytosis  (1 genes)  IMP  
GO:0016126 [list] [network] sterol biosynthetic process  (23 genes)  TAS  
GO:0009958 [list] [network] positive gravitropism  (39 genes)  IMP  
GO:0000911 [list] [network] cytokinesis by cell plate formation  (70 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0047793 [list] [network] cycloeucalenol cycloisomerase activity  (1 genes)  IDA IEA  
KEGG ath00100 [list] [network] Steroid biosynthesis (36 genes)
Protein NP_001190504.1  NP_001331972.1  NP_568727.1 
BLAST NP_001190504.1  NP_001331972.1  NP_568727.1 
Orthologous [Ortholog page] LOC7454702 (ppo)  LOC9270960 (osa)  LOC11427814 (mtr)  CPI (sly)  LOC100777966 (gma)  LOC100780309 (gma)  LOC103842220 (bra)  LOC103858451 (bra)  LOC123086881 (tae)  LOC123091100 (tae)  LOC123096100 (tae)  LOC123123551 (tae)  LOC123128693 (tae)  LOC123134769 (tae)  LOC123145824 (tae)  LOC123447753 (hvu)  LOC123453115 (hvu) 
Subcellular
localization
wolf
plas 4,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for NP_001190504.1)
plas 5,  cyto 2,  extr 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for NP_001331972.1)
plas 5,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_568727.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_001190504.1)
mito 7,  other 5  (predict for NP_001331972.1)
other 7,  scret 3  (predict for NP_568727.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 5
ath00900 Terpenoid backbone biosynthesis 2
Genes directly connected with CPI1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 SMO1-2 sterol C4-methyl oxidase 1-2 [detail] 828374
6.8 AT5G57700 BNR/Asp-box repeat family protein [detail] 835877
6.7 FPS2 farnesyl diphosphate synthase 2 [detail] 827430
5.9 YSL4 YELLOW STRIPE like 4 [detail] 834102
5.9 FK Ergosterol biosynthesis ERG4/ERG24 family [detail] 824460
Coexpressed
gene list		 [Coexpressed gene list for CPI1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248511_at
248511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248511_at
248511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248511_at
248511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835105      
Refseq ID (protein) NP_001190504.1 
NP_001331972.1 
NP_568727.1 


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