[←][→] ath   At5g50780 Gene
functional annotation
Function   Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein      
GO BP
GO:1902290 [list] [network] positive regulation of defense response to oomycetes  (10 genes)  IMP  
GO:0044030 [list] [network] regulation of DNA methylation  (19 genes)  IMP  
GO:0006282 [list] [network] regulation of DNA repair  (21 genes)  ISS  
GO:0060966 [list] [network] regulation of gene silencing by RNA  (25 genes)  ISS  
GO CC
GO:0010369 [list] [network] chromocenter  (12 genes)  IDA  
GO:0016604 [list] [network] nuclear body  (86 genes)  IDA  
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM ISS  
GO MF
GO:0004519 [list] [network] endonuclease activity  (108 genes)  ISS  
GO:0043621 [list] [network] protein self-association  (109 genes)  IDA IPI  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IEA ISS  
GO:0003677 [list] [network] DNA binding  (1277 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1729 genes)  ISS  
KEGG
Protein NP_001331717.1  NP_001331718.1  NP_199891.4 
BLAST NP_001331717.1  NP_001331718.1  NP_199891.4 
Orthologous [Ortholog page] AT4G24970 (ath)  LOC4329338 (osa)  LOC4335453 (osa)  LOC7454581 (ppo)  LOC7456621 (ppo)  LOC25501991 (mtr)  LOC100786679 (gma)  LOC100816702 (gma)  LOC101245442 (sly)  LOC101265386 (sly)  LOC101267836 (sly)  LOC103857271 (bra)  LOC103861517 (bra)  LOC103862766 (bra)  LOC123045215 (tae)  LOC123053048 (tae)  LOC123188960 (tae)  LOC123426436 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001331717.1)
nucl 6,  cyto 3  (predict for NP_001331718.1)
nucl 5,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_199891.4)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_001331717.1)
other 8  (predict for NP_001331718.1)
other 5,  chlo 5  (predict for NP_199891.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT5G50780 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 SMP1 Pre-mRNA splicing Prp18-interacting factor [detail] 842877
6.0 AT1G35660 erythroid differentiation factor-like protein [detail] 840468
5.3 UBP18 ubiquitin-specific protease 18 [detail] 829295
Coexpressed
gene list		 [Coexpressed gene list for AT5G50780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248495_at
248495_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248495_at
248495_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248495_at
248495_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835150      
Refseq ID (protein) NP_001331717.1 
NP_001331718.1 
NP_199891.4 


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