[←][→] ath   At5g50920 Gene
functional annotation
Function   CLPC homologue 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (23 genes)  IMP  
GO:0045037 [list] [network] protein import into chloroplast stroma  (24 genes)  IMP  
GO:0045036 [list] [network] protein targeting to chloroplast  (45 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0031897 [list] [network] Tic complex  (5 genes)  TAS  
GO:0009706 [list] [network] chloroplast inner membrane  (61 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (16 genes)  IDA  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_568746.1 
BLAST NP_568746.1 
Orthologous [Ortholog page] HSP93-III (ath)  LOC4335702 (osa)  LOC4350258 (osa)  LOC4351828 (osa)  LOC7456642 (ppo)  LOC11438455 (mtr)  LOC18103824 (ppo)  LOC25489942 (mtr)  LOC25491143 (mtr)  LOC100795228 (gma)  LOC100796195 (gma)  LOC100804035 (gma)  LOC100814891 (gma)  CD4B (sly)  CD4A (sly)  LOC103857258 (bra)  LOC103873112 (bra)  LOC103874893 (bra)  LOC123045336 (tae)  LOC123053174 (tae)  LOC123086810 (tae)  LOC123102898 (tae)  LOC123110954 (tae)  LOC123119951 (tae)  LOC123127440 (tae)  LOC123137256 (tae)  LOC123144540 (tae)  LOC123189087 (tae)  LOC123398804 (hvu)  LOC123426575 (hvu)  LOC123447806 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_568746.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_568746.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 VAR2 FtsH extracellular protease family [detail] 817646
8.8 PREP1 presequence protease 1 [detail] 821451
8.7 HDS 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [detail] 836181
6.5 TED4 Plant heme oxygenase (decyclizing) family protein [detail] 817208
Coexpressed
gene list		 [Coexpressed gene list for CLPC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248480_at
248480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248480_at
248480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248480_at
248480_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835165      
Refseq ID (protein) NP_568746.1 


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