[←][→] ath   AT5G51300 Gene
functional annotation
Function   splicing factor-like protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IEA  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (194 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEP IMP NAS  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA IPI ISM  
GO MF
GO:0045131 [list] [network] pre-mRNA branch point binding  (1 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001032055.1  NP_199943.1  NP_851169.1 
BLAST NP_001032055.1  NP_199943.1  NP_851169.1 
Orthologous [Ortholog page] LOC7465495 (ppo)  LOC9268114 (osa)  LOC25491878 (mtr)  LOC100267539 (vvi)  LOC100383202 (zma)  LOC100800982 (gma)  LOC100818518 (gma)  LOC101266106 (sly)  LOC103646582 (zma)  LOC103857190 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001032055.1)
nucl 10  (predict for NP_199943.1)
nucl 10  (predict for NP_851169.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001032055.1)
other 6,  chlo 5  (predict for NP_199943.1)
other 6,  chlo 5  (predict for NP_851169.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 3
Genes directly connected with AT5G51300 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.6 AT2G25970 KH domain-containing protein [detail] 817137
10.5 ELF7 hydroxyproline-rich glycoprotein family protein [detail] 844312
10.0 NRPB1 RNA polymerase II large subunit [detail] 829734
9.3 AT1G33680 KH domain-containing protein [detail] 840259
8.7 SE C2H2 zinc-finger protein SERRATE (SE) [detail] 817252
8.7 AT1G27750 nucleic acid binding protein [detail] 839668
8.5 AT1G10390 Nucleoporin autopeptidase [detail] 837579
8.3 SUF4 zinc finger (C2H2 type) family protein [detail] 839984
8.1 AT4G10070 KH domain-containing protein [detail] 826598
7.2 FY Transducin/WD40 repeat-like superfamily protein [detail] 831191
7.1 AT5G02850 hydroxyproline-rich glycoprotein family protein [detail] 831762
Coexpressed
gene list		 [Coexpressed gene list for AT5G51300]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248452_at
248452_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248452_at
248452_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248452_at
248452_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835204      
Refseq ID (protein) NP_001032055.1 
NP_199943.1 
NP_851169.1 


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