[←][→] ath   At5g52890 Gene
functional annotation
Function   AT hook motif-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1903046 [list] [network] meiotic cell cycle process  (255 genes)  IEA  
GO:0048646 [list] [network] anatomical structure formation involved in morphogenesis  (266 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0048869 [list] [network] cellular developmental process  (1335 genes)  IEA  
GO:0009314 [list] [network] response to radiation  (2018 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001190525.1  NP_200101.2 
BLAST NP_001190525.1  NP_200101.2 
Orthologous [Ortholog page] AT5G54930 (ath)  AT4G21895 (ath)  LOC7470954 (ppo)  LOC7479062 (ppo)  LOC11428253 (mtr)  LOC11444180 (mtr)  LOC18095973 (ppo)  LOC18111266 (ppo)  LOC100783413 (gma)  LOC100789400 (gma)  LOC100801020 (gma)  LOC100817103 (gma)  LOC101249564 (sly)  LOC101258199 (sly)  LOC101259217 (sly)  LOC103834228 (bra)  LOC103844770 (bra)  LOC103844943 (bra)  LOC103852069 (bra)  LOC103857018 (bra)  LOC103859566 (bra)  LOC103859584 (bra)  LOC103861256 (bra)  LOC104646186 (sly)  LOC112326297 (ppo) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for NP_001190525.1)
nucl 8,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for NP_200101.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_001190525.1)
other 7,  chlo 4  (predict for NP_200101.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G52890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 MAKR6 membrane-associated kinase regulator [detail] 835367
3.7 AT5G03970 F-box associated ubiquitination effector family protein [detail] 830276
3.4 AT3G20280 RING/FYVE/PHD zinc finger superfamily protein [detail] 821572
Coexpressed
gene list		 [Coexpressed gene list for AT5G52890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248278_at
248278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248278_at
248278_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248278_at
248278_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835366      
Refseq ID (protein) NP_001190525.1 
NP_200101.2 


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