[←][→] ath   AT5G52950 Gene
functional annotation
Function   LIM domain protein  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
KEGG
Protein NP_001332602.1  NP_200107.2 
BLAST NP_001332602.1  NP_200107.2 
Orthologous [Ortholog page] LOC4326698 (osa)  LOC7489799 (ppo)  LOC11416493 (mtr)  LOC100243267 (vvi)  LOC100277819 (zma)  LOC101257240 (sly)  LOC102660949 (gma)  LOC103846087 (bra)  LOC103849111 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1,  extr 1,  cysk 1  (predict for NP_001332602.1)
nucl 4,  chlo 2,  cyto 1,  chlo_mito 1  (predict for NP_200107.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001332602.1)
other 6  (predict for NP_200107.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03440 Homologous recombination 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with AT5G52950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.5 MCM6 minichromosome maintenance (MCM2/3/5) family protein [detail] 834492
13.1 AT3G56870 hypothetical protein [detail] 824854
13.1 ORC1B origin of replication complex 1B [detail] 826875
9.9 SNI1 negative regulator of systemic acquired resistance (SNI1) [detail] 827577
7.9 AT5G02520 dentin sialophosphoprotein-like protein [detail] 831892
5.7 AT1G04650 holliday junction resolvase [detail] 839457
Coexpressed
gene list		 [Coexpressed gene list for AT5G52950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248280_at
248280_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248280_at
248280_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248280_at
248280_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835372      
Refseq ID (protein) NP_001332602.1 
NP_200107.2 


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